build: make zarr dependency optional #231
Workflow file for this run
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| # This workflow will install Python dependencies, run tests and lint with a variety of Python versions | |
| # For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | |
| name: Test | |
| on: | |
| push: | |
| branches: [ main ] | |
| pull_request: | |
| branches: [ main ] | |
| workflow_dispatch: | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| test: | |
| name: os=${{ matrix.os }}, py=${{ matrix.python-version }}, zarr-python=${{ matrix.zarr-version }} | |
| strategy: | |
| matrix: | |
| python-version: ['3.11', '3.12', '3.13'] | |
| zarr-version: ['3.0.10', '3.1.0', 'none'] | |
| os: ["ubuntu-latest"] | |
| runs-on: ${{ matrix.os }} | |
| steps: | |
| - uses: actions/checkout@v5 | |
| - name: Set up Python | |
| uses: actions/setup-python@v6 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| cache: 'pip' | |
| - name: Install Hatch | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install hatch | |
| - name: Run Tests (with zarr) | |
| if: matrix.zarr-version != 'none' | |
| run: | | |
| hatch run test.py${{ matrix.python-version }}-${{ matrix.zarr-version }}:list-env | |
| hatch run test.py${{ matrix.python-version }}-${{ matrix.zarr-version }}:test-cov | |
| - name: Run Tests (without zarr) | |
| if: matrix.zarr-version == 'none' | |
| run: | | |
| hatch run test-base.py${{ matrix.python-version }}:list-env | |
| hatch run test-base.py${{ matrix.python-version }}:test-cov | |
| - name: Upload coverage | |
| uses: codecov/codecov-action@v5 | |
| with: | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| verbose: true # optional (default = false) | |
| doctests: | |
| name: doctests | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v5 | |
| with: | |
| fetch-depth: 0 # required for hatch version discovery, which is needed for numcodecs.zarr3 | |
| - name: Set up Python | |
| uses: actions/setup-python@v6 | |
| with: | |
| python-version: '3.11' | |
| cache: 'pip' | |
| - name: Install Hatch | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install hatch | |
| - name: Run Tests | |
| run: | | |
| hatch run docs:test |