Skip to content
@ylab-hi

YangLab@Northwestern

This repo stores the codes for Yang lab projects

Popular repositories Loading

  1. ScanNeo ScanNeo Public

    A pipeline for identifying indel derived neoantigens using RNA-Seq data

    Python 28 7

  2. pxblat pxblat Public

    PxBLAT: An Efficient and Ergonomic Python Binding Library for BLAT

    C 16

  3. ScanExitron ScanExitron Public

    A computational workflow for exitron splicing identification

    Shell 12 6

  4. ScanNeo2 ScanNeo2 Public

    Snakemake-based computational workflow for neoantigen prediction from diverse sources

    Python 10 1

  5. ScanITD ScanITD Public

    A python tool to detect internal tandem duplication with robust variant allele frequency estimation

    Rez 9 3

  6. ScanExitronLR ScanExitronLR Public

    A package for the characterization and quantification of exitron splicing events in long-read RNA-seq

    Python 5

Repositories

Showing 10 of 13 repositories
  • pxblat Public

    PxBLAT: An Efficient and Ergonomic Python Binding Library for BLAT

    ylab-hi/pxblat’s past year of commit activity
    C 16 0 3 0 Updated Jul 3, 2024
  • yanglab-guide Public

    The repo contain content about yang's lab guide.

    ylab-hi/yanglab-guide’s past year of commit activity
    Python 2 MIT 2 0 16 Updated Jul 2, 2024
  • ScanNeo2 Public

    Snakemake-based computational workflow for neoantigen prediction from diverse sources

    ylab-hi/ScanNeo2’s past year of commit activity
    Python 10 MIT 1 5 0 Updated Jun 27, 2024
  • ylab-hi.github.io Public

    Official website for Yang Lab

    ylab-hi/ylab-hi.github.io’s past year of commit activity
    SCSS 0 0 0 0 Updated Jun 23, 2024
  • ScanExitron Public

    A computational workflow for exitron splicing identification

    ylab-hi/ScanExitron’s past year of commit activity
    Shell 12 MIT 6 2 1 Updated Jun 22, 2024
  • docker-images Public

    docker-images

    ylab-hi/docker-images’s past year of commit activity
    Dockerfile 1 MIT 0 0 0 Updated Apr 24, 2024
  • ScanITD Public

    A python tool to detect internal tandem duplication with robust variant allele frequency estimation

    ylab-hi/ScanITD’s past year of commit activity
    Rez 9 MIT 3 2 0 Updated Nov 16, 2023
  • ScanExitronLR Public

    A package for the characterization and quantification of exitron splicing events in long-read RNA-seq

    ylab-hi/ScanExitronLR’s past year of commit activity
    Python 5 MIT 0 0 1 Updated Aug 5, 2023
  • BINARY Public

    BIoiNformatics Algorithms libRarY aka BINARY

    ylab-hi/BINARY’s past year of commit activity
    C++ 2 Apache-2.0 0 2 1 Updated Dec 21, 2022
  • ScanNeo Public

    A pipeline for identifying indel derived neoantigens using RNA-Seq data

    ylab-hi/ScanNeo’s past year of commit activity
    Python 28 7 6 0 Updated Aug 29, 2022

People

This organization has no public members. You must be a member to see who’s a part of this organization.

Top languages

Loading…

Most used topics

Loading…