Parse command string

[dlsrnsi]

When I use cluster in MISO, I configure cluster option something like this

[cluster]
cluster_command = qsub -l nodes=1:ppn=1

Cause I need to assign proper resourse to each jobs, I have to attach qsub option qsub command.

It makes problem in waiting on and launch jobs. So I just fix code.

It doesn't make any change if you use

[cluster]
cluster_command = qsub

as basic guideline suggests

But it can makes you deal with give another option to miso cluster.

However, the way that add qsub option line to cluster setting file and make cluster_utils.py recognizes it can be more elaborated way to do this thing.

I can try it, if you reply this PR.

Thank you for reading.

Ingoo Lee from GIST

[dlsrnsi]

@yarden
In addition, Multiple job submission attachs .hostname to job ID. For example

Job id                    Name             User            Time Use    S  Queue
------------------------- ---------------- --------------- ----------- -- -------
4590.hostname          

like this.
Attached hostname makes miso to fail waiting cause it can't query from qstat with invalid job ID
I think I can fix this problem by fix cluster_utils.py and noticing that hostname and resource options are recommended to be set in setting file.
If you say you're okay with my suggestion I will start to fix the code.

Thanks for reading.

from Ingoo Lee