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I built an interactive dashboard to explore the microbes that colonize human navels. The plots used here are bar, pie, and gauge with data selection from a dropdown menu.

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Plot.ly - Belly Button Biodiversity

I built an interactive dashboard to explore the Belly Button Biodiversity dataset, which catalogs the microbes that colonize human navels.

The dataset reveals that a small handful of microbial species (also called operational taxonomic units, or OTUs, in the study) were present in more than 70% of people, while the rest were relatively rare.

Plotly

  • Bar and Pie plot to use the D3 library to read in samples.json. and create a horizontal bar chart with a dropdown menu to display the top 10 OTUs found in that individual.
  • Two Gauge Chart to plot the weekly washing frequency of the individual
  • Create a bubble chart that displays each sample.

D3

  • Display the sample metadata (individual's demographic information.)

The final dashboard is shown below: sample_page

References

Hulcr, J. et al.(2012) A Jungle in There: Bacteria in Belly Buttons are Highly Diverse, but Predictable. Retrieved from: http://robdunnlab.com/projects/belly-button-biodiversity/results-and-data/


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I built an interactive dashboard to explore the microbes that colonize human navels. The plots used here are bar, pie, and gauge with data selection from a dropdown menu.

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