GitHub - wuusn/preanalytic_image

Branches Tags

Name		Name	Last commit message	Last commit date
Latest commit History 6 Commits
artifacts		artifacts
example_images		example_images
save		save
yamls		yamls
.gitignore		.gitignore
aa.py		aa.py
excel2umap.py		excel2umap.py
imageInfo2excel.py		imageInfo2excel.py
readme		readme

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# requirements
umap-learn, xlsxwriter, scikit-image, pillow, yaml, opencv-python, numpy
 
# Example 1: Write Images Info to Excel
 `$ python imageInfo2excel.py yamls/example.yaml`
 
# Example 2: Get Umap Result Image from Multi-Site Cohors Images Info Excel
 `$ python excel2umap.py yamls/example4umap.yaml`

# Check the yamls files, change the parameters for your tasks.