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kcartier-wri committed Sep 12, 2024
1 parent 67b7472 commit 2d5aafa
Showing 1 changed file with 3 additions and 12 deletions.
15 changes: 3 additions & 12 deletions .github/workflows/dev_ci_cd_conda.yml
Original file line number Diff line number Diff line change
Expand Up @@ -18,13 +18,6 @@ jobs:
shell: bash -l {0}
steps:
- uses: actions/checkout@v4
- uses: conda-incubator/setup-miniconda@v2
with:
miniconda-version: "latest"
channels: bioconda, conda-forge, defaults
use-only-tar-bz2: true # IMPORTANT: This needs to be set for caching to work properly!
auto-update-conda: true
auto-activate-base: true
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v5
with:
Expand All @@ -36,13 +29,11 @@ jobs:
sudo apt install -y gdal-bin libgdal-dev
- name: Install Packages
run: |
conda env create --name env --file=.github/environment.yml --yes
conda env update --file=.github/environment.yml --name base --yes
- name: Install GDAL
run: |
conda install gdal --yes
conda upgrade numpy --yes
- name: Initialize Environment
run: |
source ~/.bashrc
conda activate env
- name: Run Tests
env:
GOOGLE_APPLICATION_USER: ${{ secrets.GOOGLE_APPLICATION_USER }}
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