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Reflections from spot checking the SBML directory #7

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jonrkarr opened this issue Mar 1, 2022 · 1 comment

jonrkarr commented Mar 1, 2022

SBML directory: https://github.com/virtualcell/vcdb/blob/main/published/biomodel/omex/sbml/

Checked 100596964, 12119723
Manifests: look good
OMEX metadata/RDF files: missing; required for publication to BioSimulations
Summary images: missing; we suggest including a graphical summary for publication to BioSimulations

100596964

SED-ML: use with VCML looks good (passes validation)

12119723

Archive has 6 SBML files, but only 3 are used in SED-ML -- see [BUG] SED-ML files do not simulate all SBML files #6
SBML has errors -- see [BUG] 1 or more SBML files have errors with the spatial package #5

The text was updated successfully, but these errors were encountered:

Author

jonrkarr commented Mar 1, 2022

Closing. Needed/recommended changes are outlined in other issues.

jonrkarr closed this as completed

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