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WCST_behavioral_model_and_analysis

Project co-developed with Jeong-Woo Kim and Yue Liu

SSM package

ssm package modified from original source here: https://github.com/lindermanlab/ssm

Installation direction

git clone https://github.com/lindermanlab/ssm
cd ssm
pip install numpy cython
pip install -e .

fitModel.py

  • fits HLM-GLM model to data in rawData/inputs/
  • writes saved model to rawData/modelSaves/

analyzeFits.py

  • runs all analysis (choice and transition probabilities, category analysis, inter-species performance comparison)
  • writes results to analysis/

predictObject.ipynb

  • reads files from rawData/forObjectPred/ and analysis/ (created by analyzeFits.py)
  • processes, statistically tests and visualizes results

Fig<1-7>.ipynb

  • reads files from analysis/
  • processes, statistically tests and visualizes results
  • saves figures in .eps format to figures/

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