clean up tests

turtletopia · Apr 7, 2024 · e50cf38 · e50cf38
1 parent 5cae3ac
commit e50cf38
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Showing 77 changed files with 137,672 additions and 40,570 deletions.
diff --git a/DESCRIPTION b/DESCRIPTION
@@ -20,7 +20,8 @@ Depends:
     R (>= 4.1.0)
 Imports: 
     httr2 (>= 1.0.0),
-    rlang,
+    rlang (>= 1.0.0),
+    utils,
     versionsort (>= 1.1.0)
 Suggests: 
     covr,

diff --git a/NAMESPACE b/NAMESPACE
@@ -43,12 +43,3 @@ export(wood_url_dependencies)
 export(wood_url_packages)
 export(wood_url_version)
 export(wood_versions)
-importFrom(httr,GET)
-importFrom(httr,content)
-importFrom(httr,status_code)
-importFrom(httr,stop_for_status)
-importFrom(stats,setNames)
-importFrom(utils,install.packages)
-importFrom(utils,installed.packages)
-importFrom(utils,menu)
-importFrom(versionsort,ver_sort)
diff --git a/R/core-dependencies.R b/R/core-dependencies.R
@@ -15,12 +15,11 @@
 #'
 #' @family core
 #' @family dependencies
-#' @importFrom utils installed.packages
 #' @export
 wood_core_dependencies <- function(package) {
   assert_param_package(package)
 
-  core_pkgs <- installed.packages(priority = "base")
+  core_pkgs <- utils::installed.packages(priority = "base")
   validate_core_package(package, core_pkgs)
 
   extract_dependencies(core_pkgs[package, ])

diff --git a/R/core-packages.R b/R/core-packages.R
@@ -9,8 +9,7 @@
 #'
 #' @family core
 #' @family packages
-#' @importFrom utils installed.packages
 #' @export
 wood_core_packages <- function() {
-  rownames(installed.packages(priority = "base"))
+  rownames(utils::installed.packages(priority = "base"))
 }
diff --git a/R/core-version.R b/R/core-version.R
@@ -12,12 +12,11 @@
 #'
 #' @family core
 #' @family versions
-#' @importFrom utils installed.packages
 #' @export
 wood_core_version <- function(package) {
   assert_param_package(package)
 
-  core_pkgs <- installed.packages(priority = "base")
+  core_pkgs <- utils::installed.packages(priority = "base")
   validate_core_package(package, core_pkgs)
 
   core_pkgs[package, "Version"]

diff --git a/R/local-dependencies.R b/R/local-dependencies.R
@@ -13,7 +13,7 @@
 #'
 #' @examples
 #' wood_local_dependencies("woodendesc")
-#' wood_local_dependencies("httr", paths = "all")
+#' wood_local_dependencies("httr2", paths = "all")
 #'
 #' @family local
 #' @family dependencies

diff --git a/R/local-versions.R b/R/local-versions.R
@@ -9,7 +9,7 @@
 #' @return A character vector of version codes.
 #'
 #' @examples
-#' wood_local_versions("httr")
+#' wood_local_versions("httr2")
 #'
 #' @family local
 #' @family versions

diff --git a/R/wood-versions.R b/R/wood-versions.R
@@ -23,7 +23,6 @@
 #'
 #' @family wood
 #' @family versions
-#' @importFrom versionsort ver_sort
 #' @export
 wood_versions <- function(packages, repos = "cran") {
   assert_param_packages(packages)
@@ -32,7 +31,7 @@ wood_versions <- function(packages, repos = "cran") {
   query_makers <- interpret_repos(repos, context = "version")
 
   ret <- lapply(packages, function(package) {
-    ver_sort(collect_repos(query_makers, package = package))
+    versionsort::ver_sort(collect_repos(query_makers, package = package))
   })
   names(ret) <- packages
   ret

diff --git a/man/wood_local_dependencies.Rd b/man/wood_local_dependencies.Rd
diff --git a/man/wood_local_versions.Rd b/man/wood_local_versions.Rd
diff --git a/tests/fixtures/Biostrings-deps-old.yml b/tests/fixtures/Biostrings-deps-old.yml
diff --git a/tests/fixtures/Biostrings-deps.yml b/tests/fixtures/Biostrings-deps.yml
diff --git a/tests/fixtures/RDG-deps.yml b/tests/fixtures/RDG-deps.yml
diff --git a/tests/fixtures/RGD-version.yml b/tests/fixtures/RGD-version.yml