Computational Pathology Toolbox developed by TIA Centre, University of Warwick.

Stain normalization tools for histological analysis and computational pathology

RandStainNA: Simple and efficient augmentations for histology [MICCAI 2022]

StainNet: a fast and robust stain normalization network

adaptive color deconvolution for paper "Zheng et al., CMPB, 2019"

Pytorch-adaptation of GPU-accelerated StainTool's stain normalization algorithms

Gpu accelerated vahadane stain normalization for Digital Pathology workflows.

🌟 GPU-accelerated stain normalization command line tool

Pytorch implementation of Self Attentive Adversarial Stain Normalization (SAASN).

The code for stain standardization capsule

ParamNet: a parameter-variable network for fast stain normalization

This repo contains source code for the paper: "Evaluating the Effectiveness of Stain Normalization Techniques in Automated Grading of Invasive Ductal Carcinoma Histopathological Images?"

Tricks based on stain variations for histology analysis

Code associated with engineering thesis "Learning-Based Staining Normalization for Improving Registration of Histology Images"

I included 7 sample lung pathology images (Lung Adenocarcinoma, Squamos Cell Carcinoma, and Mesothelioma). Attached are folders containing each respective samples and specific normalization results.

Whole Slide Image Stain Normalisation and Augmentation

Official Repo of "MS-SST: Single Image Reconstruction-based Stain-Style Transfer for Multi-domain Hematoxylin & Eosin Stained Pathology Images"

stain augmentation method based on stainmix up using multiple known stain matrices.

Scripts and figures as a part of an ongoing research initiative for Advancing Hepatocellular Carcinoma Staging and Prognosis