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Support Python 3.13 #858

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Support Python 3.13 #858

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@Zethson Zethson commented Jan 21, 2025

Just to see what the CI does

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Upgrade to Python 3.13
483af6e 
Signed-off-by: Lukas Heumos <[email protected]>
@github-actions github-actions bot added the enhancement New feature or request label Jan 21, 2025
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Zethson commented Jan 21, 2025 

    import ehrapy as ep
/opt/hostedtoolcache/Python/3.13.1/x64/lib/python3.13/site-packages/ehrapy/__init__.py:17: in <module>
    from ehrapy import data as dt
/opt/hostedtoolcache/Python/3.13.1/x64/lib/python3.13/site-packages/ehrapy/data/__init__.py:1: in <module>
    from ehrapy.data._datasets import (
/opt/hostedtoolcache/Python/3.13.1/x64/lib/python3.13/site-packages/ehrapy/data/_datasets.py:8: in <module>
    from ehrapy.io._read import read_csv, read_fhir, read_h5ad
/opt/hostedtoolcache/Python/3.13.1/x64/lib/python3.13/site-packages/ehrapy/io/__init__.py:1: in <module>
    from ehrapy.io._read import df_to_anndata, read_csv, read_fhir, read_h5ad
/opt/hostedtoolcache/Python/3.13.1/x64/lib/python3.13/site-packages/ehrapy/io/_read.py:18: in <module>
    from ehrapy.preprocessing._encoding import encode
/opt/hostedtoolcache/Python/3.13.1/x64/lib/python3.13/site-packages/ehrapy/preprocessing/__init__.py:12: in <module>
    from ehrapy.preprocessing._normalization import (
/opt/hostedtoolcache/Python/3.13.1/x64/lib/python3.13/site-packages/ehrapy/preprocessing/_normalization.py:13: in <module>
    import dask_ml.preprocessing as daskml_pp
/opt/hostedtoolcache/Python/3.13.1/x64/lib/python3.13/site-packages/dask_ml/preprocessing/__init__.py:5: in <module>
    from .data import (
/opt/hostedtoolcache/Python/3.13.1/x64/lib/python3.13/site-packages/dask_ml/preprocessing/data.py:1048: in <module>
    class PolynomialFeatures(DaskMLBaseMixin, sklearn.preprocessing.PolynomialFeatures):
/opt/hostedtoolcache/Python/3.13.1/x64/lib/python3.13/site-packages/dask_ml/preprocessing/data.py:1060: in PolynomialFeatures
    __doc__ = "".join([splitted_orig_doc[0], __doc__, splitted_orig_doc[1]])
E   IndexError: list index out of range

Looks like dask-ml has issues

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