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Institut Gustave Roussy
- Paris
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00:12
(UTC +02:00)
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fair_genome_indexer
fair_genome_indexer PublicDownload and index Ensembl sequences and annotations
Python
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fair_bowtie2_mapping
fair_bowtie2_mapping PublicAlign reads over a reference genome, filter aligned-reads, and mark duplicates
Python
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fair_gatk_mutect2
fair_gatk_mutect2 PublicSnakemake workflow used to call germline and/or somatic variants with GATK Mutect2
Python 1
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fair_macs2_calling
fair_macs2_calling PublicSnakemake workflow used to call peaks with Macs2
Python
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fair_rnaseq_salmon_quant
fair_rnaseq_salmon_quant PublicSnakemake workflow designed to perform RNASeq transcrpotime expression estimation with Salmon
Python
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