chore: call scripts directly #19

Job	Run time
call-build / list-images	5s
call-build / build-images (docker/python-plotting)	2m 18s
call-build / build-images (docker/minfi)	2m 59s
call-build / build-images (docker/umap)	9m 37s
call-build / build-images (docker/bwa)	1m 0s
call-build / build-images (docker/star)	46s
call-build / build-images (docker/estimate)	41s
call-build / build-images (docker/pandas)	1m 6s
call-build / build-images (docker/util)	2m 12s
call-test / list-tags	8s
call-test / pytest_check (arriba)	1m 18s
call-test / pytest_check (bwa)	54s
call-test / pytest_check (deeptools)	1m 19s
call-test / pytest_check (estimate)	28s
call-test / pytest_check (fastqc)	42s
call-test / pytest_check (flag_filter)	1m 13s
call-test / pytest_check (fq)	44s
call-test / pytest_check (gatk4)	2m 19s
call-test / pytest_check (htseq)	1m 0s
call-test / pytest_check (kraken)	40s
call-test / pytest_check (librarian)	54s
call-test / pytest_check (md5sum)	42s
call-test / pytest_check (methylation)	4m 12s
call-test / pytest_check (mosdepth)	1m 13s
call-test / pytest_check (multiqc)	1m 37s
call-test / pytest_check (ngsderive)	1m 34s
call-test / pytest_check (picard)	2m 54s
call-test / pytest_check (qualimap)	1m 6s
call-test / pytest_check (read_group)	59s
call-test / pytest_check (reference)	25s
call-test / pytest_check (sambamba)	57s
call-test / pytest_check (samtools)	2m 3s
call-test / pytest_check (star)	1m 30s
call-test / pytest_check (util)	1m 29s
	53m 4s

Provide feedback