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@stjude-dnb-binfcore

stjude-dnb-binfcore

Bioinformatics Core at the St. Jude Children's Research Hospital

🙌 Welcome to the DNB Bioinformatics Core at the St. Jude Children's Research Hospital!

This is our shared space for project data analysis, training materials, and resources developed by the team. Whether you're collaborating on a pipeline, learning something new, or just exploring, you're in the right place. We provide advanced bioinformatic services for investigators to leverage genomics, proteomics, and metabolomics (omics) data. Dive in and make yourself at home!

📊 Project analysis support

🚀 Pipeline development and automation

👷 Benchmark methods and tools to choose the best one for the project and analysis

💪 Advise on methods, tools, and analysis strategies and facilitate discussions with CAB St. Jude Research

👩‍💻 Useful resources and training

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  1. sc-rna-seq-snap sc-rna-seq-snap Public

    Automated and containerized workflow for 10X single cell and single nuclei RNA (sc/snRNA) data.

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  2. sc-epigenie sc-epigenie Public

    Automated and containerized workflow for 10X single cell and single nuclei ATAC (sc/snATAC) data.

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  3. sc-rna-seq-snap-10x-Flex sc-rna-seq-snap-10x-Flex Public

    Automated and containerized workflow for 10X Flex single cell and single nuclei RNA (sc/snRNA) data.

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  4. trainings trainings Public

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  5. epigenomic-profiling-analysis epigenomic-profiling-analysis Public

    Automated workflow for epigenomics seq data

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Repositories

Showing 10 of 41 repositories

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