GitHub - sterlesser/cancersim: A cancer cell simulation

Branches Tags

Name		Name	Last commit message	Last commit date
Latest commit History 6 Commits
code		code
docs		docs
papers		papers
.dropbox		.dropbox
.gitignore		.gitignore
__init__.py		__init__.py
config.py		config.py
newconfig.py		newconfig.py
original_config.py		original_config.py
positions.xyz		positions.xyz
quick_load.py		quick_load.py
quick_test_sim.py		quick_test_sim.py
readme		readme
test_sim.py		test_sim.py
test_sim2.py		test_sim2.py
test_sim_above.py		test_sim_above.py
test_sim_below.py		test_sim_below.py
test_sim_justabove.py		test_sim_justabove.py
test_sim_justbelow.py		test_sim_justbelow.py
testout.dat		testout.dat
todo.rst		todo.rst

Repository files navigation

This is where the CancerSim code and docs live.

Code is in code directory
Docs in docs

Example code usage in test_sim.py

TODO:
    Clean up documentation
    Try to speed up code through caching.
    
WISHLIST:
    Fix the plotting routine to show cell radii
    Fix the errant cell links across domain
    Cache links (done ?)
    cache KDTree ?
    Play with potentials