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fix tests

fix tests #1137

Triggered via push February 6, 2024 23:38
Status Failure
Total duration 26m 4s
Artifacts 2

check-bioc.yml

on: push
Matrix: build-check
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15 errors and 17 warnings
ubuntu-latest (4.2)
Process completed with exit code 1.
ubuntu-latest (4.2)
Process completed with exit code 1.
windows-latest (4.2)
R CMD check found ERRORs
windows-latest (4.2)
Test failures
windows-latest (4.2)
Process completed with exit code 1.
macOS-latest (4.2)
Packages suggested but not available:
macOS-latest (4.2)
Packages suggested but not available:
macOS-latest (4.2)
R CMD check found ERRORs
macOS-latest (4.2)
Process completed with exit code 1.
macOS-latest (4.2)
package or namespace load failed for ‘AnnotationDbi’ in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]):
macOS-latest (4.2)
package or namespace load failed for ‘AnnotationDbi’ in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]):
macOS-latest (4.2)
package or namespace load failed for ‘AnnotationDbi’ in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]):
macOS-latest (4.2)
package or namespace load failed for ‘AnnotationDbi’ in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]):
macOS-latest (4.2)
package or namespace load failed for ‘DESeq2’ in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]):
macOS-latest (4.2)
loading failed
ubuntu-latest (4.2)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2, actions/cache@v3, actions/upload-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
ubuntu-latest (4.2)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
ubuntu-latest (4.2)
No files were found with the provided path: check. No artifacts will be uploaded.
windows-latest (4.2)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2, actions/cache@v3, actions/upload-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
windows-latest (4.2)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
macOS-latest (4.2)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2, actions/cache@v3, actions/upload-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
macOS-latest (4.2)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
macOS-latest (4.2)
‘nmaxi’ may be used uninitialized in this function [-Wmaybe-uninitialized]
macOS-latest (4.2)
‘out’ may be used uninitialized in this function [-Wmaybe-uninitialized]
macOS-latest (4.2)
Nonconforming tab character at (1) [-Wtabs]
macOS-latest (4.2)
Nonconforming tab character at (1) [-Wtabs]
macOS-latest (4.2)
Unused variable ‘t2’ declared at (1) [-Wunused-variable]
macOS-latest (4.2)
Unused variable ‘t3’ declared at (1) [-Wunused-variable]
macOS-latest (4.2)
Unused variable ‘t4’ declared at (1) [-Wunused-variable]
macOS-latest (4.2)
Unused variable ‘t5’ declared at (1) [-Wunused-variable]
macOS-latest (4.2)
Unused variable ‘t0’ declared at (1) [-Wunused-variable]
macOS-latest (4.2)
Unused variable ‘t1’ declared at (1) [-Wunused-variable]

Artifacts

Produced during runtime
Name Size
Windows-biocversion-RELEASE_3_16-r-4.2-results Expired
10.6 MB
macOS-biocversion-RELEASE_3_16-r-4.2-results Expired
6.64 MB