Process completed with exit code 1.

Process completed with exit code 1.

R CMD check found WARNINGs

Process completed with exit code 1.

R CMD check found WARNINGs

Process completed with exit code 1.

package or namespace load failed for ‘AnnotationDbi’ in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]):

package or namespace load failed for ‘AnnotationDbi’ in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]):

package or namespace load failed for ‘AnnotationDbi’ in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]):

package or namespace load failed for ‘AnnotationDbi’ in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]):

package or namespace load failed for ‘DESeq2’ in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]):

loading failed

--- re-building ‘introduction.Rmd’ using knitr

processing vignette 'introduction.Rmd' failed with diagnostics:

Vignette re-building failed.

Failed to install 'tidybulk' from local:

The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/

No files were found with the provided path: check. No artifacts will be uploaded.

The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/

'library' or 'require' call not declared from: 'parallel'

'library' or 'require' call not declared from: 'parallel'

The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/

'library' or 'require' call not declared from: ‘parallel’

'library' or 'require' call not declared from: ‘parallel’

‘nmaxi’ may be used uninitialized in this function [-Wmaybe-uninitialized]

‘out’ may be used uninitialized in this function [-Wmaybe-uninitialized]

Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]

Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]

Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]

Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]

Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]

Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]

‘fin’ may be used uninitialized in this function [-Wmaybe-uninitialized]