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TIleDB-SOMA 1.8.0

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@johnkerl johnkerl released this 07 Mar 00:09
· 36 commits to release-1.8 since this release
1e57a6b

New features added

  • [python] Add default thread pool in SOMATileDBContext by @ebezzi in #2001
  • [Backport release-1.8] [python] Expose tiledbsoma.io.ExperimentAmbientLabelMapping by @github-actions in #2179

Breaking changes

Minor changes

  • [Backport release-1.8] [python] Refactor pybind11 inheritance to reduce repetition by @github-actions in #2162
  • [r/ci] Controlled downgrade for TileDB-R 0.23 by @johnkerl in #2157
  • [release-1.8] Revert #2162 by @johnkerl in #2164
  • Sync main to release-1.8 as much as possible, in prep for #2158 by @johnkerl in #2165
  • [Backport release-1.8] Backport #2158 and #2166 to release-1.8 by @johnkerl in #2170
  • [python] Refactor pybind11 inheritance to reduce repetition by @nguyenv in #2126
  • [Backport release-1.8] [c++/ci] Update make format and CI format-checker to find more C++ files by @johnkerl in #2168
  • [python] Use _internal_tiledb_config in native_context by @nguyenv in #2166
  • [python] Do not copy libtiledbsoma.so into package_data if it already exists by @github-actions in #1937
    -- * Sync main to release-1.8 by @johnkerl in #2192
  • [Backport release-1.8] fix scripts/bld typo (aarch64 opts) by @github-actions in #2196
  • [Backport release-1.8] [python] Fix a lint fail on main by @github-actions in #2206
  • [Backport release-1.8] [ci] Updated hard-coded core version in another file by @github-actions in #2213
    -- * [r] tiledbsoma-r 1.8.3 by @johnkerl in #2215
  • [release-1.8] Backport #2220 and #2221 by @johnkerl in #2222

Bug fixes

  • [Backport release-1.8] [python] Fix race in SOMADataFrame schema with multiple enumerated columns by @github-actions in #2199
  • [Backport release-1.8] [r] Call array schema evolution after loop setting up enums by @github-actions in #2204
  • [Backport release-1.8] [python] Fix inconsistency in DictFilterSpec docstring by @github-actions in #2151
  • [release-1.8] Fix context-type for tiledbsoma_build_index by @johnkerl in #2227
  • [release-1.8] Append LD_LIBRARY_PATH for census by @johnkerl in #2217