[python] Do not mutate adata.obs/adata.var on ingest
#3467
Workflow file for this run
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| name: TileDB-SOMA Python CI (Minimal) | |
| # This workflow calls ./python-ci-single.yml on a limited subset of the | |
| # {os} x {python version} matrix. It runs for all branches, in contrast to | |
| # ./python-ci-full.yml, which exhausts the matrix but only for main & releases, | |
| # since that's CI-resource-intensive. | |
| # | |
| # To test the full matrix on a working branch, invoke ./python-ci-full.yml from | |
| # https://github.com/single-cell-data/TileDB-SOMA/actions/workflows/python-ci-full.yml | |
| on: | |
| pull_request: | |
| branches: | |
| - main | |
| - 'release-*' | |
| paths-ignore: | |
| - 'apis/r/**' | |
| workflow_dispatch: | |
| jobs: | |
| build: | |
| strategy: | |
| fail-fast: true | |
| matrix: | |
| os: [ubuntu-22.04, macos-12] | |
| python-version: ['3.10', '3.7'] | |
| include: | |
| - os: ubuntu-22.04 | |
| cc: gcc-11 | |
| cxx: g++-11 | |
| - os: macos-12 | |
| cc: clang | |
| cxx: clang++ | |
| uses: ./.github/workflows/python-ci-single.yml | |
| with: | |
| os: ${{ matrix.os }} | |
| python_version: ${{ matrix.python-version }} | |
| cc: ${{ matrix.cc }} | |
| cxx: ${{ matrix.cxx }} | |
| report_codecov: ${{ matrix.python-version == '3.10' }} | |
| run_lint: ${{ matrix.python-version == '3.10' }} | |
| secrets: inherit |