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Features #369

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merged 76 commits into from
Mar 21, 2025
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f914a30
Test new pathing for Band object in mt_metadata
kkappler Dec 26, 2024
cb86a49
Reduce number of instances for test and update mt_metadata branch
kkappler Dec 26, 2024
eed21ba
try suppress mtpy-v2 reinstall
kkappler Dec 26, 2024
cb1225e
update import get_fft_harmonics to new path in mt_metadata
kkappler Dec 26, 2024
df77152
replace some calls to decimation attrs with access to time_series_dec…
kkappler Dec 27, 2024
5fa3fe7
change var name and add dtype (local tests pass)
kkappler Dec 27, 2024
4931648
add some dtyping and doc
kkappler Dec 28, 2024
12d4cf4
add doc/notes
kkappler Dec 28, 2024
f0abee1
add TODO
kkappler Dec 28, 2024
f7cc243
add typehint, tests pass locally
kkappler Dec 28, 2024
65732fa
updates for partial compatability with mt_metadata issue 238 (local t…
kkappler Dec 28, 2024
ab90d8b
access recoloring via stft
kkappler Dec 29, 2024
264dfc6
add a variation on tests
kkappler Dec 29, 2024
c21793d
comment out notebooks for clearer error messages
kkappler Dec 29, 2024
503758b
towards mt_metadata 235
kkappler Dec 29, 2024
6e69bca
Update per changes in mt_metadata
kkappler Dec 29, 2024
6a27f92
try another way to make tests pass
kkappler Dec 30, 2024
c0a885d
add test (towards issue #363)
kkappler Dec 31, 2024
41a414b
echo some env info
kkappler Dec 31, 2024
5a630e2
fix typo
kkappler Jan 2, 2025
5b44182
update window imports
kkappler Jan 2, 2025
031202c
towards mth5 spectrograms (partial factoring)
kkappler Jan 2, 2025
14c6507
add TODO and clarify argument
kkappler Jan 2, 2025
f290c61
add some TODOs
kkappler Jan 2, 2025
5dab8b9
factor add_spectrogram_to_mth5 from add_fcs_to_mth5
kkappler Jan 2, 2025
e0601d7
try another way to make tests pass
kkappler Jan 3, 2025
91fbc7b
remane xrts to xrds
kkappler Jan 3, 2025
96b3844
modify tests to preinstall branches of mth5, mt_metadata
kkappler Jan 3, 2025
33e88c4
cleanup yaml
kkappler Jan 3, 2025
914998a
uncommnet ipynb tests
kkappler Jan 4, 2025
80ab668
Merge pull request #367 from simpeg/try_fix_tests
kkappler Jan 4, 2025
8484fb1
Merge pull request #366 from simpeg/fix_mth5_issue_271
kkappler Jan 4, 2025
5fc4a0f
Merge pull request #365 from simpeg/fix_mt_metadata_issue_241
kkappler Jan 4, 2025
a2a10ec
update doc and TODOs
kkappler Jan 4, 2025
831a58f
remove unused sample_rate validation
kkappler Jan 4, 2025
8f9172f
replace decimation.window with decimation.stft.window
kkappler Jan 4, 2025
e0e8e54
apply updates from mt_metadata to access stft attrs
kkappler Jan 4, 2025
2f4a10d
update syntax to new mt_metadata decimation
kkappler Jan 5, 2025
c229015
update ipynb for mt_metadata decimation
kkappler Jan 5, 2025
55557b5
update ipynb for mt_metadata decimation
kkappler Jan 5, 2025
3849b89
update syntax to new mt_metadata decimation
kkappler Jan 5, 2025
ae76455
remove spectrogram (will replace with mth5 Spectrogram)
Jan 6, 2025
aef6c2b
replace aurora's extract_band method with mth5 method
Jan 6, 2025
3ec3ed5
replace apply_prewhitening with mth5 method
Jan 6, 2025
384a08d
replace aurora's apply_recoloring method with mth5's version
Jan 6, 2025
5cd5a84
suppress ipynb from tests
Jan 6, 2025
57e7037
re-add tests
Jan 6, 2025
e7aaf4f
replace –_add_spectrorgrams_to_mth5 with mth5 method
Jan 6, 2025
614c889
replace –read_back_fcs with mth5 method
Jan 6, 2025
286a01e
suppress ipynb tests
Jan 6, 2025
962906e
replace duplicate method with mt_metadata
Jan 6, 2025
13fc2b8
add doc
kkappler Jan 7, 2025
966b911
replace imports from pipelines/fourier_coefficients with mth5
kkappler Jan 7, 2025
3d53ddc
remove fourier_coefficients.py
kkappler Jan 7, 2025
8eb8a24
reenable ipynb tests
kkappler Jan 7, 2025
eaea779
update imports in ipynb
kkappler Jan 7, 2025
9a53fee
replace run_ts_to_stft_scipy with mth5 method
kkappler Jan 7, 2025
07f55a2
add some typehints
kkappler Jan 10, 2025
cba95a2
minor changes to doc
kkappler Jan 10, 2025
b282dc3
update test now that FrequencyBands uses dataframe
kkappler Jan 10, 2025
0166cc6
update name of initialize_xrda_2d to initialize_xrda_2d_cov
kkappler Jan 11, 2025
1235919
remove tests (now in mth5) for initialize_xrda_1d
kkappler Jan 11, 2025
6f84bea
update to use xarray helpers from mth5
kkappler Jan 11, 2025
a2f40ef
update import
kkappler Jan 11, 2025
f1cec92
update flake8 to be consistent with mth5 (80lines)
kkappler Jan 18, 2025
8f5745e
Merge branch 'features' of kkappler-github:simpeg/aurora into features
kkappler Jan 18, 2025
2725077
minor updates to doc
kkappler Feb 8, 2025
242a50d
Add tap point for spectrograms
kkappler Feb 23, 2025
9a481fe
Merge pull request #374 from simpeg/fix_issue_364
kkappler Mar 1, 2025
1703a1d
add doc about circular typehint import
kkappler Mar 1, 2025
44a22a5
remove unneeded code (now in mtpy-v2)
kkappler Mar 1, 2025
43ae014
point to features mtpy
kkappler Mar 8, 2025
2e4b76b
Update typehints in tfk
kkappler Mar 8, 2025
f58d175
tidy up comments
kkappler Mar 8, 2025
acaf90d
improve typehinting
kkappler Mar 8, 2025
99b6fb5
update renamed function call
kkappler Mar 8, 2025
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try suppress mtpy-v2 reinstall
kkappler committed Dec 26, 2024
commit eed21ba726134bacf54c05b472097dd38153a125
2 changes: 1 addition & 1 deletion setup.py
Original file line number Diff line number Diff line change
@@ -13,7 +13,7 @@
requirements = [
# "mt_metadata",
# "mth5",
"mtpy-v2",
# "mtpy-v2",
"numba",
"psutil",
]