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@sifrimlab

LMIB

KU Leuven research group that aims to develop novel computational methodologies for data fusion and pattern recognition.

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  1. ST-nextflow-pipeline ST-nextflow-pipeline Public

    This repository contains the entire codebase necessary to pilot STAPLE, an automated end-to-end pipeline that processes Spatial Transcriptomics datasets.

    Python 1

  2. enteric_neuron_tools enteric_neuron_tools Public

    This repository contains both a script and a gui to process .czi images and count and segment enteric neurons that are visualized on one of the channels.

    Python

  3. pyxelperfect pyxelperfect Public

    Collection of image-processing tools for bioinformatic applications

    Python 5

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