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Update latest documentation
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2 changes: 2 additions & 0 deletions latest/_sources/changelog.rst.txt
Original file line number Diff line number Diff line change
Expand Up @@ -13,6 +13,8 @@ New Features

- Add 'matching' method to :func:`identity_by_state` function.
(:user:`timothymillar`, :pr:`1229`, :issue:`1227`)
- Add 'chunks' option to :func:`pedigree_kinship` function.
(:user:`timothymillar`, :pr:`1282`, :issue:`1280`)

Breaking changes
~~~~~~~~~~~~~~~~
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2 changes: 1 addition & 1 deletion latest/_static/basic.css
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Expand Up @@ -55,7 +55,7 @@ div.sphinxsidebarwrapper {

div.sphinxsidebar {
float: left;
width: 270px;
width: 230px;
margin-left: -100%;
font-size: 90%;
word-wrap: break-word;
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242 changes: 121 additions & 121 deletions latest/_static/pygments.css

Large diffs are not rendered by default.

2 changes: 1 addition & 1 deletion latest/_static/scripts/pydata-sphinx-theme.js

Large diffs are not rendered by default.

2 changes: 1 addition & 1 deletion latest/_static/scripts/pydata-sphinx-theme.js.map

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6 changes: 3 additions & 3 deletions latest/_static/styles/pydata-sphinx-theme.css

Large diffs are not rendered by default.

2 changes: 1 addition & 1 deletion latest/_static/styles/pydata-sphinx-theme.css.map

Large diffs are not rendered by default.

14 changes: 7 additions & 7 deletions latest/_static/webpack-macros.html
Original file line number Diff line number Diff line change
Expand Up @@ -5,20 +5,20 @@

{% macro head_pre_assets() %}
<!-- Loaded before other Sphinx assets -->
<link href="{{ pathto('_static/styles/theme.css', 1) }}?digest=26a4bc78f4c0ddb94549" rel="stylesheet" />
<link href="{{ pathto('_static/styles/pydata-sphinx-theme.css', 1) }}?digest=26a4bc78f4c0ddb94549" rel="stylesheet" />
<link href="{{ pathto('_static/styles/theme.css', 1) }}?digest=8878045cc6db502f8baf" rel="stylesheet" />
<link href="{{ pathto('_static/styles/pydata-sphinx-theme.css', 1) }}?digest=8878045cc6db502f8baf" rel="stylesheet" />
{% endmacro %}

{% macro head_js_preload() %}
<!-- So that users can add custom icons -->
<script src="{{ pathto('_static/scripts/fontawesome.js', 1) }}?digest=26a4bc78f4c0ddb94549"></script>
<script src="{{ pathto('_static/scripts/fontawesome.js', 1) }}?digest=8878045cc6db502f8baf"></script>
<!-- Pre-loaded scripts that we'll load fully later -->
<link rel="preload" as="script" href="{{ pathto('_static/scripts/bootstrap.js', 1) }}?digest=26a4bc78f4c0ddb94549" />
<link rel="preload" as="script" href="{{ pathto('_static/scripts/pydata-sphinx-theme.js', 1) }}?digest=26a4bc78f4c0ddb94549" />
<link rel="preload" as="script" href="{{ pathto('_static/scripts/bootstrap.js', 1) }}?digest=8878045cc6db502f8baf" />
<link rel="preload" as="script" href="{{ pathto('_static/scripts/pydata-sphinx-theme.js', 1) }}?digest=8878045cc6db502f8baf" />
{% endmacro %}

{% macro body_post() %}
<!-- Scripts loaded after <body> so the DOM is not blocked -->
<script defer src="{{ pathto('_static/scripts/bootstrap.js', 1) }}?digest=26a4bc78f4c0ddb94549"></script>
<script defer src="{{ pathto('_static/scripts/pydata-sphinx-theme.js', 1) }}?digest=26a4bc78f4c0ddb94549"></script>
<script defer src="{{ pathto('_static/scripts/bootstrap.js', 1) }}?digest=8878045cc6db502f8baf"></script>
<script defer src="{{ pathto('_static/scripts/pydata-sphinx-theme.js', 1) }}?digest=8878045cc6db502f8baf"></script>
{% endmacro %}
53 changes: 31 additions & 22 deletions latest/about.html
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Expand Up @@ -17,8 +17,8 @@
document.documentElement.dataset.mode = localStorage.getItem("mode") || "";
document.documentElement.dataset.theme = localStorage.getItem("theme") || "";
</script>
<!--
this give us a css class that will be invisible only if js is disabled
<!--
this give us a css class that will be invisible only if js is disabled
-->
<noscript>
<style>
Expand All @@ -28,8 +28,8 @@
</noscript>

<!-- Loaded before other Sphinx assets -->
<link href="_static/styles/theme.css?digest=26a4bc78f4c0ddb94549" rel="stylesheet" />
<link href="_static/styles/pydata-sphinx-theme.css?digest=26a4bc78f4c0ddb94549" rel="stylesheet" />
<link href="_static/styles/theme.css?digest=8878045cc6db502f8baf" rel="stylesheet" />
<link href="_static/styles/pydata-sphinx-theme.css?digest=8878045cc6db502f8baf" rel="stylesheet" />

<link rel="stylesheet" type="text/css" href="_static/pygments.css" />
<link rel="stylesheet" type="text/css" href="_static/typehints.css" />
Expand All @@ -38,20 +38,21 @@
<link rel="stylesheet" type="text/css" href="https://cdn.jsdelivr.net/npm/docsearch.js@2/dist/cdn/docsearch.min.css" />

<!-- So that users can add custom icons -->
<script src="_static/scripts/fontawesome.js?digest=26a4bc78f4c0ddb94549"></script>
<script src="_static/scripts/fontawesome.js?digest=8878045cc6db502f8baf"></script>
<!-- Pre-loaded scripts that we'll load fully later -->
<link rel="preload" as="script" href="_static/scripts/bootstrap.js?digest=26a4bc78f4c0ddb94549" />
<link rel="preload" as="script" href="_static/scripts/pydata-sphinx-theme.js?digest=26a4bc78f4c0ddb94549" />
<link rel="preload" as="script" href="_static/scripts/bootstrap.js?digest=8878045cc6db502f8baf" />
<link rel="preload" as="script" href="_static/scripts/pydata-sphinx-theme.js?digest=8878045cc6db502f8baf" />

<script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
<script src="_static/doctools.js"></script>
<script src="_static/sphinx_highlight.js"></script>
<script>DOCUMENTATION_OPTIONS.pagename = 'about';</script>
<script>
DOCUMENTATION_OPTIONS.theme_version = '0.16.0';
DOCUMENTATION_OPTIONS.theme_version = '0.16.1';
DOCUMENTATION_OPTIONS.theme_switcher_json_url = 'https://sgkit-dev.github.io/sgkit/latest/_static/switcher.json';
DOCUMENTATION_OPTIONS.theme_switcher_version_match = 'latest';
DOCUMENTATION_OPTIONS.show_version_warning_banner = false;
DOCUMENTATION_OPTIONS.show_version_warning_banner =
false;
</script>
<script defer="defer" src="https://cdn.jsdelivr.net/npm/docsearch.js@2/dist/cdn/docsearch.min.js"></script>
<script defer="defer" src="_static/docsearch.sbt.js"></script>
Expand Down Expand Up @@ -179,7 +180,9 @@
</li>

<li class="nav-item dropdown">
<button class="btn dropdown-toggle nav-item" type="button" data-bs-toggle="dropdown" aria-expanded="false" aria-controls="pst-nav-more-links">
<button class="btn dropdown-toggle nav-item" type="button"
data-bs-toggle="dropdown" aria-expanded="false"
aria-controls="pst-nav-more-links">
More
</button>
<ul id="pst-nav-more-links" class="dropdown-menu">
Expand Down Expand Up @@ -454,9 +457,14 @@


<div class="sidebar-primary-items__end sidebar-primary__section">
<div class="sidebar-primary-item">
<div id="ethical-ad-placement"
class="flat"
data-ea-publisher="readthedocs"
data-ea-type="readthedocs-sidebar"
data-ea-manual="true">
</div></div>
</div>

<div id="rtd-footer-container"></div>


</div>
Expand Down Expand Up @@ -554,13 +562,13 @@


<div class="sidebar-secondary-item">

<div class="tocsection sourcelink">
<a href="_sources/about.rst.txt">
<i class="fa-solid fa-file-lines"></i> Show Source
</a>
</div>
</div>
<div role="note" aria-label="source link">
<h3>This Page</h3>
<ul class="this-page-menu">
<li><a href="_sources/about.rst.txt"
rel="nofollow">Show Source</a></li>
</ul>
</div></div>

</div></div>

Expand All @@ -575,8 +583,8 @@
</div>

<!-- Scripts loaded after <body> so the DOM is not blocked -->
<script defer src="_static/scripts/bootstrap.js?digest=26a4bc78f4c0ddb94549"></script>
<script defer src="_static/scripts/pydata-sphinx-theme.js?digest=26a4bc78f4c0ddb94549"></script>
<script defer src="_static/scripts/bootstrap.js?digest=8878045cc6db502f8baf"></script>
<script defer src="_static/scripts/pydata-sphinx-theme.js?digest=8878045cc6db502f8baf"></script>

<footer class="bd-footer">
<div class="bd-footer__inner bd-page-width">
Expand Down Expand Up @@ -609,7 +617,8 @@

<div class="footer-item">
<p class="theme-version">
Built with the <a href="https://pydata-sphinx-theme.readthedocs.io/en/stable/index.html">PyData Sphinx Theme</a> 0.16.0.
<!-- # L10n: Setting the PST URL as an argument as this does not need to be localized -->
Built with the <a href="https://pydata-sphinx-theme.readthedocs.io/en/stable/index.html">PyData Sphinx Theme</a> 0.16.1.
</p></div>

</div>
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53 changes: 31 additions & 22 deletions latest/api.html
Original file line number Diff line number Diff line change
Expand Up @@ -17,8 +17,8 @@
document.documentElement.dataset.mode = localStorage.getItem("mode") || "";
document.documentElement.dataset.theme = localStorage.getItem("theme") || "";
</script>
<!--
this give us a css class that will be invisible only if js is disabled
<!--
this give us a css class that will be invisible only if js is disabled
-->
<noscript>
<style>
Expand All @@ -28,8 +28,8 @@
</noscript>

<!-- Loaded before other Sphinx assets -->
<link href="_static/styles/theme.css?digest=26a4bc78f4c0ddb94549" rel="stylesheet" />
<link href="_static/styles/pydata-sphinx-theme.css?digest=26a4bc78f4c0ddb94549" rel="stylesheet" />
<link href="_static/styles/theme.css?digest=8878045cc6db502f8baf" rel="stylesheet" />
<link href="_static/styles/pydata-sphinx-theme.css?digest=8878045cc6db502f8baf" rel="stylesheet" />

<link rel="stylesheet" type="text/css" href="_static/pygments.css" />
<link rel="stylesheet" type="text/css" href="_static/typehints.css" />
Expand All @@ -38,20 +38,21 @@
<link rel="stylesheet" type="text/css" href="https://cdn.jsdelivr.net/npm/docsearch.js@2/dist/cdn/docsearch.min.css" />

<!-- So that users can add custom icons -->
<script src="_static/scripts/fontawesome.js?digest=26a4bc78f4c0ddb94549"></script>
<script src="_static/scripts/fontawesome.js?digest=8878045cc6db502f8baf"></script>
<!-- Pre-loaded scripts that we'll load fully later -->
<link rel="preload" as="script" href="_static/scripts/bootstrap.js?digest=26a4bc78f4c0ddb94549" />
<link rel="preload" as="script" href="_static/scripts/pydata-sphinx-theme.js?digest=26a4bc78f4c0ddb94549" />
<link rel="preload" as="script" href="_static/scripts/bootstrap.js?digest=8878045cc6db502f8baf" />
<link rel="preload" as="script" href="_static/scripts/pydata-sphinx-theme.js?digest=8878045cc6db502f8baf" />

<script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
<script src="_static/doctools.js"></script>
<script src="_static/sphinx_highlight.js"></script>
<script>DOCUMENTATION_OPTIONS.pagename = 'api';</script>
<script>
DOCUMENTATION_OPTIONS.theme_version = '0.16.0';
DOCUMENTATION_OPTIONS.theme_version = '0.16.1';
DOCUMENTATION_OPTIONS.theme_switcher_json_url = 'https://sgkit-dev.github.io/sgkit/latest/_static/switcher.json';
DOCUMENTATION_OPTIONS.theme_switcher_version_match = 'latest';
DOCUMENTATION_OPTIONS.show_version_warning_banner = false;
DOCUMENTATION_OPTIONS.show_version_warning_banner =
false;
</script>
<script defer="defer" src="https://cdn.jsdelivr.net/npm/docsearch.js@2/dist/cdn/docsearch.min.js"></script>
<script defer="defer" src="_static/docsearch.sbt.js"></script>
Expand Down Expand Up @@ -179,7 +180,9 @@
</li>

<li class="nav-item dropdown">
<button class="btn dropdown-toggle nav-item" type="button" data-bs-toggle="dropdown" aria-expanded="false" aria-controls="pst-nav-more-links">
<button class="btn dropdown-toggle nav-item" type="button"
data-bs-toggle="dropdown" aria-expanded="false"
aria-controls="pst-nav-more-links">
More
</button>
<ul id="pst-nav-more-links" class="dropdown-menu">
Expand Down Expand Up @@ -628,9 +631,14 @@


<div class="sidebar-primary-items__end sidebar-primary__section">
<div class="sidebar-primary-item">
<div id="ethical-ad-placement"
class="flat"
data-ea-publisher="readthedocs"
data-ea-type="readthedocs-sidebar"
data-ea-manual="true">
</div></div>
</div>

<div id="rtd-footer-container"></div>


</div>
Expand Down Expand Up @@ -1306,13 +1314,13 @@ <h2>Utilities<a class="headerlink" href="#utilities" title="Permalink to this he
</nav></div>

<div class="sidebar-secondary-item">

<div class="tocsection sourcelink">
<a href="_sources/api.rst.txt">
<i class="fa-solid fa-file-lines"></i> Show Source
</a>
</div>
</div>
<div role="note" aria-label="source link">
<h3>This Page</h3>
<ul class="this-page-menu">
<li><a href="_sources/api.rst.txt"
rel="nofollow">Show Source</a></li>
</ul>
</div></div>

</div></div>

Expand All @@ -1327,8 +1335,8 @@ <h2>Utilities<a class="headerlink" href="#utilities" title="Permalink to this he
</div>

<!-- Scripts loaded after <body> so the DOM is not blocked -->
<script defer src="_static/scripts/bootstrap.js?digest=26a4bc78f4c0ddb94549"></script>
<script defer src="_static/scripts/pydata-sphinx-theme.js?digest=26a4bc78f4c0ddb94549"></script>
<script defer src="_static/scripts/bootstrap.js?digest=8878045cc6db502f8baf"></script>
<script defer src="_static/scripts/pydata-sphinx-theme.js?digest=8878045cc6db502f8baf"></script>

<footer class="bd-footer">
<div class="bd-footer__inner bd-page-width">
Expand Down Expand Up @@ -1361,7 +1369,8 @@ <h2>Utilities<a class="headerlink" href="#utilities" title="Permalink to this he

<div class="footer-item">
<p class="theme-version">
Built with the <a href="https://pydata-sphinx-theme.readthedocs.io/en/stable/index.html">PyData Sphinx Theme</a> 0.16.0.
<!-- # L10n: Setting the PST URL as an argument as this does not need to be localized -->
Built with the <a href="https://pydata-sphinx-theme.readthedocs.io/en/stable/index.html">PyData Sphinx Theme</a> 0.16.1.
</p></div>

</div>
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39 changes: 24 additions & 15 deletions latest/blog.html
Original file line number Diff line number Diff line change
Expand Up @@ -16,8 +16,8 @@
document.documentElement.dataset.mode = localStorage.getItem("mode") || "";
document.documentElement.dataset.theme = localStorage.getItem("theme") || "";
</script>
<!--
this give us a css class that will be invisible only if js is disabled
<!--
this give us a css class that will be invisible only if js is disabled
-->
<noscript>
<style>
Expand All @@ -27,8 +27,8 @@
</noscript>

<!-- Loaded before other Sphinx assets -->
<link href="_static/styles/theme.css?digest=26a4bc78f4c0ddb94549" rel="stylesheet" />
<link href="_static/styles/pydata-sphinx-theme.css?digest=26a4bc78f4c0ddb94549" rel="stylesheet" />
<link href="_static/styles/theme.css?digest=8878045cc6db502f8baf" rel="stylesheet" />
<link href="_static/styles/pydata-sphinx-theme.css?digest=8878045cc6db502f8baf" rel="stylesheet" />

<link rel="stylesheet" type="text/css" href="_static/pygments.css" />
<link rel="stylesheet" type="text/css" href="_static/typehints.css" />
Expand All @@ -37,20 +37,21 @@
<link rel="stylesheet" type="text/css" href="https://cdn.jsdelivr.net/npm/docsearch.js@2/dist/cdn/docsearch.min.css" />

<!-- So that users can add custom icons -->
<script src="_static/scripts/fontawesome.js?digest=26a4bc78f4c0ddb94549"></script>
<script src="_static/scripts/fontawesome.js?digest=8878045cc6db502f8baf"></script>
<!-- Pre-loaded scripts that we'll load fully later -->
<link rel="preload" as="script" href="_static/scripts/bootstrap.js?digest=26a4bc78f4c0ddb94549" />
<link rel="preload" as="script" href="_static/scripts/pydata-sphinx-theme.js?digest=26a4bc78f4c0ddb94549" />
<link rel="preload" as="script" href="_static/scripts/bootstrap.js?digest=8878045cc6db502f8baf" />
<link rel="preload" as="script" href="_static/scripts/pydata-sphinx-theme.js?digest=8878045cc6db502f8baf" />

<script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
<script src="_static/doctools.js"></script>
<script src="_static/sphinx_highlight.js"></script>
<script>DOCUMENTATION_OPTIONS.pagename = 'blog';</script>
<script>
DOCUMENTATION_OPTIONS.theme_version = '0.16.0';
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DOCUMENTATION_OPTIONS.show_version_warning_banner =
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<script defer="defer" src="_static/docsearch.sbt.js"></script>
Expand Down Expand Up @@ -183,7 +184,9 @@
</li>

<li class="nav-item dropdown">
<button class="btn dropdown-toggle nav-item" type="button" data-bs-toggle="dropdown" aria-expanded="false" aria-controls="pst-nav-more-links">
<button class="btn dropdown-toggle nav-item" type="button"
data-bs-toggle="dropdown" aria-expanded="false"
aria-controls="pst-nav-more-links">
More
</button>
<ul id="pst-nav-more-links" class="dropdown-menu">
Expand Down Expand Up @@ -447,9 +450,14 @@


<div class="sidebar-primary-items__end sidebar-primary__section">
<div class="sidebar-primary-item">
<div id="ethical-ad-placement"
class="flat"
data-ea-publisher="readthedocs"
data-ea-type="readthedocs-sidebar"
data-ea-manual="true">
</div></div>
</div>

<div id="rtd-footer-container"></div>


</div>
Expand Down Expand Up @@ -576,8 +584,8 @@ <h2 class="ablog-post-title">
</div>

<!-- Scripts loaded after <body> so the DOM is not blocked -->
<script defer src="_static/scripts/bootstrap.js?digest=26a4bc78f4c0ddb94549"></script>
<script defer src="_static/scripts/pydata-sphinx-theme.js?digest=26a4bc78f4c0ddb94549"></script>
<script defer src="_static/scripts/bootstrap.js?digest=8878045cc6db502f8baf"></script>
<script defer src="_static/scripts/pydata-sphinx-theme.js?digest=8878045cc6db502f8baf"></script>

<footer class="bd-footer">
<div class="bd-footer__inner bd-page-width">
Expand Down Expand Up @@ -610,7 +618,8 @@ <h2 class="ablog-post-title">

<div class="footer-item">
<p class="theme-version">
Built with the <a href="https://pydata-sphinx-theme.readthedocs.io/en/stable/index.html">PyData Sphinx Theme</a> 0.16.0.
<!-- # L10n: Setting the PST URL as an argument as this does not need to be localized -->
Built with the <a href="https://pydata-sphinx-theme.readthedocs.io/en/stable/index.html">PyData Sphinx Theme</a> 0.16.1.
</p></div>

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