New feature:
- Window pop-up events are implemented to give a warning message if any of the required fields are not filled properly.
- A loading indicator (e.g., spinner animation) is triggered immediately in the layout of the circular and two-way view plots.
- User interface (including control and view panels) for RNA and DNA SV plot in the circular/network module is re-arranged to avoid any confusion.
- A in-house script at "inst/example" folder is provide to demonstrate how to obtain TCGA short variant profile in MAF format via Genomic Data Commons Data Portal
- The link between the table view to the linear view for short variant data (SNVs and Indels) is added.
- A new column comment is added for SV DNA/RNA input data format, which allows users to make a comment on the quality of SV.
Fix bugs:
- The link problem between the table view to the linear view for SV data has been completely fixed.
- The issue of FuSViz installation on Mac M1/M2 machine via Docker/Podman is clarified.
- Fix the issue of layout space for two-way view plot due to too many transcript isoforms.
- Fix a bug of loading read alignment in CRAM format