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Update preprocessing steps in feature extraction#4

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awxlong wants to merge 7 commits intosecrierlab:mainfrom
awxlong:preprocessing
Open

Update preprocessing steps in feature extraction#4
awxlong wants to merge 7 commits intosecrierlab:mainfrom
awxlong:preprocessing

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@awxlong awxlong commented Jan 17, 2025

  1. added an args.py file to parse user arguments
  2. update machine_config.py for better naming of directories created (avoid creating repetitive Data/ directory)
  3. update pre_processing.py to extract features with foundation models UNI, prov-gigapath, resnet-50 and also compute weighted adjacency matrices as in CAMIL

Xuelong An Wang added 7 commits August 27, 2024 17:54
…onfig.py for better naming of directories created (avoid creating repetitive Data/ directory); 3. update pre_processing.py to extract features with foundation models UNI, prov-gigapath, resnet-50 and also compute weighted adjacency matrices as in CAMIL
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