REHS19

Repository for the REHS 2019 Team

Material for SDSC HPC Training

April-July 2019

Contents:

• Technologies Learned
• Comet Training Notebooks
• Student Notebook Projects
• Deferred Notebooks

Technologies Learned

• Python
• Code development:
  • Languages: Python, Java
  • Atom (code dev env)
  • GitHub repositories: Summer Institute 2019
• Web Architecture
• HPC Architectures
• Jupyter
  • Notebooks
    • Python kernel
    • Java kernel
    • Others?
  • Jupyter Lab
  • Plugins/packages
    • gnuPlot
    • Pandas (data)
    • Dashboard
    • TBD

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Student Notebook Projects

• Josh - Working with Pandas
• Shayda - Accessing Data Inside and Plotting FITS Files
• Alisha -
• Ryan -

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Training Notebooks/Pages

• Boring Python (Part 1: CH 1-6)
• Using GitHub
• Logging onto Comet
• Howto Run Interactive Notebooks on Comet:
  • SSH connection
  • JupyterHub Spawn

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DEFERRED Notebooks

• Basic Linux
• Howto Run Jobs on Comet
  • Compling and Linking
  • MPI Jobs
  • OPENMP Jobs
  • GPU Jobs

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