Paper: Cyanobacteria detection in small, inland water bodies with CyFi #936
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Review reminders sent to @anivorlis @rcjackson |
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This is a very well written paper that shows how a ML-based package for identifying cyanobacteria blooms in satellite imagery can be easily deployed for use by public health officials. The idea of the community model competition shows an excellent example of how the open source community can come together to build quality ML models. I had a few small comments, but overall I would recommend for publication.
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Thanks for the review @rcjackson! I'll leave some comments in response to yours and will also take a pass at incorporating this information into the paper |
* clarify train/test splits * note on decimal degrees * note on california * tweaks * clarify ordering * move things to footnote * additional specificity on feature processing * add note on stratified k folds * explain stratified group k fold use * move to better section * copy edits * tweak --------- Co-authored-by: Katie Wetstone <[email protected]>
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Paper has been updated to address @rcjackson's review comments |
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Overall, this work has been a real pleasure to read. The ingenuity of hosting a competition to generate models, which helped guide the final architecture of CyFi, is remarkable. Additionally, a model was produced that competes well against CyAN, and incorporated into a package that installed flawlessly and provided great visualizations.
My only concerns are minor and aimed at helping readers outside of this field (such as myself) and assisting those who will later attempt to improve on CyFi. I hope these comments are well received and wish the authors the best.
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@ejm714 - please review and update acc to reviewer 2's comments. |
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@ameyxd Thanks for the ping. I was out of the office last week (immediately after I received the second review on Friday). I replied to the proceedings email to let folks know I'll have my edits in by Aug 14 |
* small review edits * add performance breakdowns * add stats from CA data * add chlorophyl-a note * train set size note * less specific footnote * add kw orcid * update author info * clarify chlorophyll * update decision tree paragraph and add footnote with links to other competitions * typo * wording tweaks * remove callout for B02 b/c we need to update that image * move conda note to footnote since this is likely only temporary * remove image (see reviewer comment response) + clarify cali table languagae * format * edits * add winners announcement * update links * add train set size * update dataframe * update footnote numbers * minor tweaks * typo --------- Co-authored-by: ejm714 <[email protected]>
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@John-Drake Thanks so much for the thoughtful review! All comments should now be addressed. Please see the latest edits. There was only one suggestion we didn't include and I left a rationale in the unresolved comment. P.S. Great meeting you at the conference 😄 |
* copy edit * wording edits * edits * concluding sentence * tweak * clarify cyanobacteria index * remove extra word
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@ameyxd just letting you know my edits are complete |
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@rcjackson @John-Drake - apologies for late notice here, but can you review the authors final edits and give a thumbs up? |
The paper is well written and interesting. The authors have done a wonderful job at addressing any comments/questions/concerns. Thumbs up all the way. |
Emily did a great job here! Thumbs up from me! |
NOTE: The title in my talk is "Using Satellite Imagery to Identify Harmful Algal Blooms and Protect Public Health".
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