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# Name of the GitHub Action | ||
name: Build plugin on Pull Request | ||
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# Specify when the Action should be triggered: when a pull request is opened against the 'devel' or 'master' branch | ||
on: | ||
pull_request: | ||
branches: [devel, master] | ||
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# Define the job that should be run | ||
jobs: | ||
build: | ||
# Specify the machine to run the job on | ||
runs-on: ubuntu-latest | ||
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# Define the steps to be taken in the job | ||
steps: | ||
# Installing scipion and miniconda dependencies | ||
- name: Install dependencies | ||
run: | | ||
sudo apt-get update | ||
sudo apt-get install -y wget gcc g++ libopenmpi-dev make | ||
# Installing Miniconda | ||
- name: Install Miniconda | ||
working-directory: ${{ github.workspace }}/../ | ||
run: | | ||
wget https://repo.anaconda.com/miniconda/Miniconda3-latest-Linux-x86_64.sh | ||
bash Miniconda3-latest-Linux-x86_64.sh -b -p miniconda/ | ||
source miniconda/etc/profile.d/conda.sh | ||
conda update -n base -c defaults conda -y | ||
# Installing Scipion | ||
- name: Install Scipion | ||
working-directory: ${{ github.workspace }}/../ | ||
run: | | ||
eval "$(miniconda/bin/conda shell.bash hook)" | ||
pip3 install --user scipion-installer | ||
python3 -m scipioninstaller -conda -noXmipp -noAsk scipion | ||
# Install scipion-chem | ||
- name: Install scipion-chem | ||
working-directory: ${{ github.workspace }}/../ | ||
run: | | ||
git clone https://github.com/scipion-chem/scipion-chem.git | ||
scipion/scipion3 installp -p scipion-chem --devel | ||
# Check out the repository in the pull request | ||
- name: Checkout repository | ||
uses: actions/checkout@v3 | ||
with: | ||
ref: ${{ github.head_ref }} | ||
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# Install plugin from the pull request using the Scipion3 installp command | ||
- name: Install plugin from pull request | ||
working-directory: ${{ github.workspace }} | ||
run: ../scipion/scipion3 installp -p . --devel |