Use 5th percentile for pseudocolor hue min

scijava · Apr 10, 2024 · bef2239 · bef2239
1 parent efe58cb
commit bef2239
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/scijava-ops-flim/src/main/java/org/scijava/ops/flim/Pseudocolor.java b/scijava-ops-flim/src/main/java/org/scijava/ops/flim/Pseudocolor.java
@@ -107,7 +107,7 @@ public Img<ARGBType> apply(final FitResults rslt, @Nullable Float cMin,
 		// min, max = 20%, 80%
 		IterableInterval<FloatType> hRawII = Views.iterable(hRaw);
 		if (cMin == null) {
-			cMin = meaner.apply(hRawII).getRealFloat() * 0.2f;
+			cMin = percentiler.apply(hRawII, 5.0f).getRealFloat();
 			System.out.println("color_min automatically set to " + cMin);
 		}
 		if (cMax == null) {