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ENH: Upgrade CI for ITK 5.4.0 #73

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277 changes: 10 additions & 267 deletions .github/workflows/build-test-package.yml
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Original file line number Diff line number Diff line change
@@ -1,272 +1,15 @@

name: Build, test, package

on: [push,pull_request]

jobs:
build-test-cxx:
runs-on: ${{ matrix.os }}
strategy:
max-parallel: 3
matrix:
os: [ubuntu-18.04, windows-2019, macos-10.15]
include:
- os: ubuntu-18.04
c-compiler: "gcc"
cxx-compiler: "g++"
itk-git-tag: "d6acfd26bfcdec606d605beb1301bddfb17c05a6"
cmake-build-type: "MinSizeRel"
- os: windows-2019
c-compiler: "cl.exe"
cxx-compiler: "cl.exe"
itk-git-tag: "d6acfd26bfcdec606d605beb1301bddfb17c05a6"
cmake-build-type: "Release"
- os: macos-10.15
c-compiler: "clang"
cxx-compiler: "clang++"
itk-git-tag: "d6acfd26bfcdec606d605beb1301bddfb17c05a6"
cmake-build-type: "MinSizeRel"

steps:
- uses: actions/checkout@v1

- name: Set up Python 3.7
uses: actions/setup-python@v1
with:
python-version: 3.7

- name: Install build dependencies
run: |
python -m pip install --upgrade pip
python -m pip install ninja

- name: Get specific version of CMake, Ninja
uses: lukka/[email protected]

- name: Download ITK
run: |
cd ..
git clone https://github.com/InsightSoftwareConsortium/ITK.git
cd ITK
git checkout ${{ matrix.itk-git-tag }}

- name: Build ITK
if: matrix.os != 'windows-2019'
run: |
cd ..
mkdir ITK-build
cd ITK-build
cmake -DCMAKE_C_COMPILER:FILEPATH="${{ matrix.c-compiler }}" -DBUILD_SHARED_LIBS:BOOL=ON -DCMAKE_CXX_COMPILER="${{ matrix.cxx-compiler }}" -DCMAKE_BUILD_TYPE:STRING=${{ matrix.cmake-build-type }} -DBUILD_TESTING:BOOL=OFF -GNinja ../ITK
ninja

- name: Build ITK
if: matrix.os == 'windows-2019'
run: |
cd ..
mkdir ITK-build
cd ITK-build
call "C:\Program Files (x86)\Microsoft Visual Studio\2019\Enterprise\VC\Auxiliary\Build\vcvars64.bat"
cmake -DCMAKE_C_COMPILER:FILEPATH="${{ matrix.c-compiler }}" -DBUILD_SHARED_LIBS:BOOL=ON -DCMAKE_CXX_COMPILER="${{ matrix.cxx-compiler }}" -DCMAKE_BUILD_TYPE:STRING=${{ matrix.cmake-build-type }} -DBUILD_TESTING:BOOL=OFF -GNinja ../ITK
ninja
shell: cmd

- name: Fetch CTest driver script
run: |
curl -L https://raw.githubusercontent.com/InsightSoftwareConsortium/ITK/dashboard/itk_common.cmake -O

- name: Configure CTest script
shell: bash
run: |
operating_system="${{ matrix.os }}"
cat > dashboard.cmake << EOF
set(CTEST_SITE "GitHubActions")
file(TO_CMAKE_PATH "\$ENV{GITHUB_WORKSPACE}/.." CTEST_DASHBOARD_ROOT)
file(TO_CMAKE_PATH "\$ENV{GITHUB_WORKSPACE}/" CTEST_SOURCE_DIRECTORY)
file(TO_CMAKE_PATH "\$ENV{GITHUB_WORKSPACE}/../build" CTEST_BINARY_DIRECTORY)
set(dashboard_source_name "${GITHUB_REPOSITORY}")
if(ENV{GITHUB_REF} MATCHES "master")
set(branch "-master")
set(dashboard_model "Continuous")
else()
set(branch "-${GITHUB_REF}")
set(dashboard_model "Experimental")
endif()
set(CTEST_BUILD_NAME "${GITHUB_REPOSITORY}-${operating_system}-\${branch}")
set(CTEST_UPDATE_VERSION_ONLY 1)
set(CTEST_TEST_ARGS \${CTEST_TEST_ARGS} PARALLEL_LEVEL \${PARALLEL_LEVEL})
set(CTEST_BUILD_CONFIGURATION "Release")
set(CTEST_CMAKE_GENERATOR "Ninja")
set(CTEST_CUSTOM_WARNING_EXCEPTION
\${CTEST_CUSTOM_WARNING_EXCEPTION}
# macOS Azure VM Warning
"ld: warning: text-based stub file"
)
set(dashboard_no_clean 1)
set(ENV{CC} ${{ matrix.c-compiler }})
set(ENV{CXX} ${{ matrix.cxx-compiler }})
if(WIN32)
set(ENV{PATH} "\${CTEST_DASHBOARD_ROOT}/ITK-build/bin;\$ENV{PATH}")
endif()
set(dashboard_cache "
ITK_DIR:PATH=\${CTEST_DASHBOARD_ROOT}/ITK-build
BUILD_TESTING:BOOL=ON
")
string(TIMESTAMP build_date "%Y-%m-%d")
message("CDash Build Identifier: \${build_date} \${CTEST_BUILD_NAME}")
message("CTEST_SITE = \${CTEST_SITE}")
include(\${CTEST_SCRIPT_DIRECTORY}/itk_common.cmake)
EOF
cat dashboard.cmake

- name: Build and test
if: matrix.os != 'windows-2019'
run: |
ctest --output-on-failure -j 2 -V -S dashboard.cmake

- name: Build and test
if: matrix.os == 'windows-2019'
run: |
call "C:\Program Files (x86)\Microsoft Visual Studio\2019\Enterprise\VC\Auxiliary\Build\vcvars64.bat"
ctest --output-on-failure -j 2 -V -S dashboard.cmake
shell: cmd

# TODO: Fix python wrapping, once fixed uncomment python tests
# build-linux-python-packages:
# runs-on: ubuntu-18.04
# strategy:
# max-parallel: 2
# matrix:
# python-version: [37, 38, 39, 310]
# include:
# - itk-python-git-tag: "v5.3rc04"
#
# steps:
# - uses: actions/checkout@v2
#
# - name: 'Free up disk space'
# run: |
# # Workaround for https://github.com/actions/virtual-environments/issues/709
# df -h
# sudo apt-get clean
# sudo rm -rf "/usr/local/share/boost"
# sudo rm -rf "$AGENT_TOOLSDIRECTORY"
# df -h
#
# - name: 'Fetch build script'
# run: |
# curl -L https://raw.githubusercontent.com/InsightSoftwareConsortium/ITKPythonPackage/master/scripts/dockcross-manylinux-download-cache-and-build-module-wheels.sh -O
# chmod u+x dockcross-manylinux-download-cache-and-build-module-wheels.sh
#
# - name: 'Build 🐍 Python 📦 package'
# run: |
# export ITK_PACKAGE_VERSION=${{ matrix.itk-python-git-tag }}
# ./dockcross-manylinux-download-cache-and-build-module-wheels.sh cp${{ matrix.python-version }}
#
# - name: Publish Python package as GitHub Artifact
# uses: actions/upload-artifact@v1
# with:
# name: LinuxWheel${{ matrix.python-version }}
# path: dist
#
# build-macos-python-packages:
# runs-on: macos-10.15
# strategy:
# max-parallel: 2
# matrix:
# include:
# - itk-python-git-tag: "v5.3rc04"
#
# steps:
# - uses: actions/checkout@v2
#
# - name: 'Fetch build script'
# run: |
# curl -L https://raw.githubusercontent.com/InsightSoftwareConsortium/ITKPythonPackage/master/scripts/macpython-download-cache-and-build-module-wheels.sh -O
# chmod u+x macpython-download-cache-and-build-module-wheels.sh
#
# - name: 'Build 🐍 Python 📦 package'
# run: |
# export ITK_PACKAGE_VERSION=${{ matrix.itk-python-git-tag }}
# export MACOSX_DEPLOYMENT_TARGET=10.9
# ./macpython-download-cache-and-build-module-wheels.sh
#
# - name: Publish Python package as GitHub Artifact
# uses: actions/upload-artifact@v1
# with:
# name: MacOSWheels
# path: dist
#
# build-windows-python-packages:
# runs-on: windows-2019
# strategy:
# max-parallel: 2
# matrix:
# python-version-minor: [7, 8, 9, 10]
# include:
# - itk-python-git-tag: "v5.3rc04"
#
# steps:
# - uses: actions/checkout@v2
# with:
# path: "im"
#
# - name: 'Install Python'
# run: |
# $pythonArch = "64"
# $pythonVersion = "3.${{ matrix.python-version-minor }}"
# iex ((new-object net.webclient).DownloadString('https://raw.githubusercontent.com/scikit-build/scikit-ci-addons/master/windows/install-python.ps1'))
#
# - name: 'Fetch build dependencies'
# shell: bash
# run: |
# mv im ../../
# cd ../../
# curl -L "https://github.com/InsightSoftwareConsortium/ITKPythonBuilds/releases/download/${{ matrix.itk-python-git-tag }}/ITKPythonBuilds-windows.zip" -o "ITKPythonBuilds-windows.zip"
# 7z x ITKPythonBuilds-windows.zip -o/c/P -aoa -r
# curl -L "https://data.kitware.com/api/v1/file/5c0ad59d8d777f2179dd3e9c/download" -o "doxygen-1.8.11.windows.bin.zip"
# 7z x doxygen-1.8.11.windows.bin.zip -o/c/P/doxygen -aoa -r
# curl -L "https://data.kitware.com/api/v1/file/5bbf87ba8d777f06b91f27d6/download/grep-win.zip" -o "grep-win.zip"
# 7z x grep-win.zip -o/c/P/grep -aoa -r
#
# - name: 'Build 🐍 Python 📦 package'
# shell: cmd
# run: |
# cd ../../im
# call "C:\Program Files (x86)\Microsoft Visual Studio\2019\Enterprise\VC\Auxiliary\Build\vcvars64.bat"
# set PATH=C:\P\grep;%PATH%
# set CC=cl.exe
# set CXX=cl.exe
# C:\Python3${{ matrix.python-version-minor }}-x64\python.exe C:\P\IPP\scripts\windows_build_module_wheels.py --py-envs "3${{ matrix.python-version-minor }}-x64"
#
# - name: Publish Python package as GitHub Artifact
# uses: actions/upload-artifact@v1
# with:
# name: WindowWheel3.${{ matrix.python-version-minor }}
# path: ../../im/dist
#
# publish-python-packages-to-pypi:
# needs:
# - build-linux-python-packages
# - build-macos-python-packages
# - build-windows-python-packages
# runs-on: ubuntu-18.04
#
# steps:
# - name: Download Python Packages
# uses: actions/download-artifact@v2
#
# - name: Prepare packages for upload
# run: |
# ls -R
# for d in */; do
# mv ${d}/*.whl .
# done
# mkdir dist
# mv *.whl dist/
# ls dist
#
# - name: Publish 🐍 Python 📦 package to PyPI
# if: github.event_name == 'push' && startsWith(github.event.ref, 'refs/tags')
# uses: pypa/gh-action-pypi-publish@master
# with:
# user: __token__
# password: ${{ secrets.pypi_password }}
cxx-build-workflow:
uses: InsightSoftwareConsortium/ITKRemoteModuleBuildTestPackageAction/.github/workflows/[email protected]

python-build-workflow:
uses: InsightSoftwareConsortium/ITKRemoteModuleBuildTestPackageAction/.github/workflows/[email protected]
with:
test-notebooks: false
secrets:
pypi_password: ${ secrets.pypi_password }
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