nbval #500
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
name: nbval | |
on: | |
workflow_dispatch: | |
paths: | |
- 'notebooks/**.ipynb' | |
- 'notebooks/**.py' | |
- 'requirements.txt' | |
- '.ci/*' | |
- '.github/workflows/*.yml' | |
- '.github/workflows/.env' | |
schedule: | |
- cron: '30 8 * * *' | |
concurrency: | |
group: ${{ github.workflow }}-${{ github.event.pull_request.number || github.run_id }} | |
cancel-in-progress: true | |
jobs: | |
build_nbval: | |
runs-on: ${{ matrix.os }} | |
strategy: | |
fail-fast: false | |
matrix: | |
os: [ubuntu-20.04, ubuntu-22.04, windows-2019, windows-2022, macos-11, macos-12] | |
python: ["3.7", "3.8", "3.9", "3.10"] | |
steps: | |
#### Installation/preparation #### | |
# | |
# These steps are also copied to convert_notebooks.yml | |
- name: Checkout repository | |
uses: actions/checkout@v2 | |
- name: Dotenv Action | |
id: dotenv | |
uses: xom9ikk/[email protected] | |
with: | |
path: ./.github/workflows | |
- name: Set up Python | |
uses: actions/setup-python@v1 | |
with: | |
python-version: ${{ matrix.python }} | |
- name: Install required packages | |
run: | | |
if [ "$RUNNER_OS" == "Linux" ]; then | |
sudo apt-get install libsndfile1 -y | |
fi | |
shell: bash | |
- name: Cache OpenVINO Pip Packages | |
id: cachepip | |
uses: actions/cache@v2 | |
with: | |
path: | | |
pipcache | |
key: ${{ env.PIP_CACHE_KEY }}-${{ matrix.os }}-${{ matrix.python }} | |
# Cache specific files to reduce downloads or prevent network issues | |
- name: Cache Files | |
id: cachefiles | |
uses: actions/cache@v2 | |
with: | |
path: | | |
# NOTE: when modifying cache paths, update FILES_CACHE_KEY in .env | |
# and change cache paths in both nbval.yml and convert_notebooks.yml | |
case_00030.zip | |
notebooks/110-ct-segmentation-quantize/kits19_frames_1 | |
notebooks/112-pytorch-post-training-quantization-nncf/output/tiny-imagenet-200.zip | |
# 208 omz cache location is set to this with test_replace | |
notebooks/208-optical-character-recognition/open_model_zoo_cache | |
notebooks/110-ct-scan-live-inference/kits19_frames_1 | |
notebooks/212-onnx-style-transfer/model | |
notebooks/302-pytorch-quantization-aware-training/data/tiny-imagenet-200.zip | |
key: ${{ env.FILES_CACHE_KEY }} | |
# PaddleGAN stores cache in ppgan directory in CACHE_DIR | |
- name: Set CACHE_DIR | |
shell: bash | |
run: | | |
python -c 'import os;print("CACHE_DIR={0}".format(os.path.expanduser(os.path.join("~", ".cache"))))' | |
# replace backslashes with forward slashes for Windows paths | |
python -c 'import os;print("CACHE_DIR={0}".format(os.path.expanduser(os.path.join("~", ".cache"))))' | sed -e 's/\\/\//g' >> $GITHUB_ENV | |
# PaddleHub stores cache in directory pointed to by HUB_HOME environment variable | |
- name: Set HUB_HOME | |
shell: bash | |
run: | | |
echo HUB_HOME=${{ env.CACHE_DIR }}/.paddlehub >> $GITHUB_ENV | |
# Cache PaddlePaddle cache directories to prevent CI failing due to network/download issues | |
- name: Cache PaddlePaddle cache directories | |
id: cacheusercache | |
uses: actions/cache@v2 | |
with: | |
path: | | |
${{ env.HUB_HOME }} | |
${{ env.CACHE_DIR }}/paddle | |
${{ env.CACHE_DIR }}/ppgan | |
key: ${{ env.USER_CACHE_KEY }}-${{ runner.os }} | |
- name: Cache openvino packages | |
if: steps.cachepip.outputs.cache-hit != 'true' | |
run: | | |
python -m pip install --upgrade pip | |
mkdir pipcache | |
python -m pip install --cache-dir pipcache --no-deps openvino openvino-dev nncf | |
cp -r pipcache pipcache_openvino | |
python -m pip uninstall -y openvino openvino-dev nncf | |
# Download a small dataset to use for testing purposes in monai-kidney training notebook | |
- name: Download CT files | |
if: steps.cachefiles.outputs.cache-hit != 'true' | |
run: | | |
curl -O https://storage.openvinotoolkit.org/data/test_data/openvino_notebooks/kits19/case_00030.zip | |
- name: Copy CT files | |
run: | | |
mkdir notebooks/110-ct-segmentation-quantize/kits19 | |
mkdir notebooks/110-ct-segmentation-quantize/kits19/kits19_frames | |
unzip case_00030.zip | |
cp -r case_00030 case_00001 | |
mv case_00030 notebooks/110-ct-segmentation-quantize/kits19/kits19_frames | |
mv case_00001 notebooks/110-ct-segmentation-quantize/kits19/kits19_frames | |
# Prevent test aborting by timeout | |
- name: Download long loading models | |
run: | | |
mkdir notebooks/203-meter-reader/model | |
curl -o notebooks/203-meter-reader/model/meter_det_model.tar.gz 'https://bj.bcebos.com/paddlex/examples2/meter_reader/meter_det_model.tar.gz' | |
curl -o notebooks/203-meter-reader/model/meter_seg_model.tar.gz 'https://bj.bcebos.com/paddlex/examples2/meter_reader/meter_seg_model.tar.gz' | |
mkdir notebooks/405-paddle-ocr-webcam/model | |
curl -o notebooks/405-paddle-ocr-webcam/model/ch_PP-OCRv3_det_infer.tar 'https://paddleocr.bj.bcebos.com/PP-OCRv3/chinese/ch_PP-OCRv3_det_infer.tar' | |
curl -o notebooks/405-paddle-ocr-webcam/model/ch_PP-OCRv3_rec_infer.tar 'https://paddleocr.bj.bcebos.com/PP-OCRv3/chinese/ch_PP-OCRv3_rec_infer.tar' | |
- name: Install dependencies | |
run: | | |
python -m pip install --upgrade pip | |
python -m pip install -r .ci/dev-requirements.txt --cache-dir pipcache | |
python -m ipykernel install --user --name openvino_env | |
# Cache OpenVINO packages. mv works cross-platform | |
- name: Make pipcache directory with OpenVINO packages | |
if: steps.cachepip.outputs.cache-hit != 'true' | |
run: | | |
mv pipcache pipcache_full | |
mv pipcache_openvino pipcache | |
# Create list of installed pip packages that can be downloaded as artifacts | |
# to verify the exact environment of a specific test run | |
- name: Pip freeze | |
run: | | |
python -m pip freeze | |
python -m pip freeze > pip-freeze-${{ github.sha }}-${{matrix.os}}-${{ matrix.python }}.txt | |
- name: Archive pip freeze | |
uses: actions/upload-artifact@v3 | |
with: | |
name: pip-freeze | |
path: pip-freeze-${{ github.sha }}-${{matrix.os}}-${{ matrix.python }}.txt | |
#### End installation/preparation | |
- name: Check install | |
run: | | |
python check_install.py | |
# Patch long running cells to run faster | |
- name: Patch notebooks | |
run: | | |
python .ci/patch_notebooks.py | |
# Test that JupyterLab runs without errors | |
- name: Test Jupyterlab | |
run: | | |
jupyter lab notebooks --help | |
# Main notebooks test. Verifies that all notebooks run without errors | |
- name: Analysing with nbval (Windows) | |
if: runner.os == 'Windows' | |
run: | | |
python .ci/validate_notebooks.py --report_dir test_report/${{matrix.os}}-${{ matrix.python }} --ignore_list 225-stable-diffusion-text-to-image --move_notebooks_dir c:/notebooks | |
shell: bash | |
- name: Analysing with nbval (Linux) | |
if: runner.os == 'Linux' | |
run: | | |
python .ci/validate_notebooks.py --report_dir test_report/${{matrix.os}}-${{ matrix.python }} --ignore_list 225-stable-diffusion-text-to-image | |
shell: bash | |
- name: Analysing with nbval (MacOS) | |
if: runner.os == 'MacOS' | |
run: | | |
python .ci/validate_notebooks.py --report_dir test_report/${{matrix.os}}-${{ matrix.python }} --ignore_list 225-stable-diffusion-text-to-image | |
shell: bash | |
- name: Archive test report | |
uses: actions/upload-artifact@v3 | |
with: | |
name: test_report.csv | |
path: test_report.csv | |
- name: Archive notebook test report | |
uses: actions/upload-artifact@v3 | |
with: | |
name: test_report | |
path: test_report/ | |
# Show the cache after running the notebooks | |
- name: Show cache | |
run: | | |
ls -laR ${{ env.CACHE_DIR }} | |
du -sh ${{ env.CACHE_DIR }} | |
if: runner.os != 'Windows' |