Update scVIIntegration to take StdAssay/SCTAssay as input
#196
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| on: [push, pull_request] | |
| jobs: | |
| test-vignettes: | |
| name: Test any changes to vignettes | |
| runs-on: ubuntu-latest | |
| container: | |
| image: satijalab/seurat-wrappers:latest | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set R repo | |
| run: echo 'options(repos = "https://cloud.r-project.org")' > ~/.Rprofile | |
| - name: Install SeuratWrappers | |
| run: devtools::install(upgrade = FALSE) | |
| shell: Rscript {0} | |
| - name: Test Vignettes | |
| run: bash test-vignettes.sh | |
| - name: Upload files | |
| uses: actions/upload-artifact@master | |
| with: | |
| name: test-build | |
| path: test-build |