[DONT MERGE] add references for temporary viewing

data/azimuth_references.yaml

@@ -139,3 +139,138 @@
     download: "https://cellxgene.cziscience.com/collections/2f75d249-1bec-459b-bf2b-b86221097ced"
     snakemake: "https://github.com/satijalab/azimuth-meta-analysis/tree/master/human_lung"
     cellxgene: "https://cellxgene.cziscience.com/e/f72958f5-7f42-4ebb-98da-445b0c6de516.cxg/"
+
+- title: Human Kidney
+  applink: http://t6e1csrfi8tn8b6.satijalab.org/app/azimuth-kidney 
+  image: kidney_revised.png
+  snakemake: 
+  zenodo: 
+  vitessce: 
+  modalities: RNA
+  unit: Cells
+  nunit: 1
+  species: Human
+  demodata: 
+  dataref:
+  details: |
+        Script: `/home/jainj/kidney/make_ref.R` in 02 // 
+        Reference dir: `/home/jainj/new-refs/kidney/` in 02
+
+- title: Human Liver
+  applink: http://t6e1csrfi8tn8b6.satijalab.org/app/azimuth-liver-revised
+  image: liver_revised.png
+  snakemake:
+  zenodo:
+  vitessce:
+  modalities: RNA
+  unit: Cells
+  nunit: 1
+  species: Human
+  demodata:
+  dataref:
+  details: |
+        Script: `/home/jainj/liver/Aizarani/make_aiz.R` in 02 // 
+        Reference dir: `/home/jainj/new-refs/liver/` in 02 // 
+        Full object: `/home/jainj/liver/fullref.rds` in 02 
+
+- title: Human Skin
+  applink: http://t6e1csrfi8tn8b6.satijalab.org/app/azimuth-skin-revised 
+  image: skin_revised.png
+  snakemake:
+  zenodo:
+  vitessce:
+  modalities: RNA
+  unit: Cells
+  nunit: 1
+  species: Human
+  demodata:
+  dataref:
+  details: |
+        Script: `/home/jainj/skin/make_ref.R` in 02 // 
+        Reference dir: `/home/jainj/new-refs/skin/` in 02 // 
+        Full object: `/home/jainj/skin/fullref.rds` in 02
+
+- title: Human Retina
+  applink: http://t6e1csrfi8tn8b6.satijalab.org/app/azimuth-retina-revised
+  image: retina_revised.png
+  snakemake:
+  zenodo:
+  vitessce:
+  modalities: RNA
+  unit: Cells
+  nunit: 1
+  species: Human
+  demodata:
+  dataref:
+  details: |
+        Script: `/home/jainj/make_retina.R` in 02 // 
+        Reference dir: `/home/jainj/new-refs/retina-revised/` in 02 // 
+        Full object: `/home/jainj/retina_fullref.rds` in 02
+
+- title: Human Spleen
+  applink: http://t6e1csrfi8tn8b6.satijalab.org/app/azimuth-spleen-revised
+  image: spleen_revised.png
+  snakemake:
+  zenodo:
+  vitessce:
+  modalities: RNA
+  unit: Cells
+  nunit: 1
+  species: Human
+  demodata:
+  dataref:
+  details: |
+        Script: `/home/jainj/spleen/make_ref.R` in 02 // 
+        Reference dir: `/home/jainj/new-refs/spleen-revised/` in 02 // 
+        Full object: `/home/jainj/spleen/fullref.rds` in 02
+
+- title: Human Colon
+  applink: http://t6e1csrfi8tn8b6.satijalab.org/app/azimuth-colon-revised
+  image: colon_revised.png
+  snakemake:
+  zenodo:
+  vitessce:
+  modalities: RNA
+  unit: Cells
+  nunit: 1
+  species: Human
+  demodata:
+  dataref:
+  details: |
+        Script: `/home/jainj/colon/make_ref.R` in 02 // 
+        Reference dir: `/home/jainj/new-refs/colon-revised/` in 02 // 
+        Full object: `/home/jainj/colon/fullref.rds` in 02
+
+- title: Human Esophagus
+  applink: http://t6e1csrfi8tn8b6.satijalab.org/app/azimuth-esophagus-revised
+  image: esophagus_revised.png
+  snakemake:
+  zenodo:
+  vitessce:
+  modalities: RNA
+  unit: Cells
+  nunit: 1
+  species: Human
+  demodata:
+  dataref:
+  details: |
+        Script: `/home/jainj/esophagus/make_madisoon.R` in 02 // 
+        Reference dir: `/home/jainj/new-refs/esophagus-revised/` in 02 //  
+        Full object: `/home/jainj/esophagus/fullref.rds` in 02
+
+- title: Human Heart
+  applink: http://t6e1csrfi8tn8b6.satijalab.org/app/azimuth-heart
+  image: heart_revised.png
+  snakemake:
+  zenodo:
+  vitessce:
+  modalities: RNA
+  unit: Cells
+  nunit: 1
+  species: Human
+  demodata:
+  dataref:
+  details: |
+        (Note: still runs on older version of Azimuth -- reference dataset is undecided) // 
+        Reference dir: `/home/jainj/new-refs/heart-demo-v4/` in 02 // 
+        Full object: `/home/jainj/heart/Teichmann/teichintg.rds` in 02