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@saalfeldlab

Saalfeld Lab

Popular repositories Loading

  1. n5 n5 Public

    Not HDF5

    Java 165 22

  2. paintera paintera Public

    Java 100 17

  3. stitching-spark stitching-spark Public

    Reconstruct big images from overlapping tiled images on a Spark cluster.

    Java 35 10

  4. render render Public

    Render transformed image tiles

    Java 34 32

  5. bigwarp bigwarp Public

    A tool for manual pointwise deformable registration using bigdataviewer.

    Java 27 14

  6. n5-viewer n5-viewer Public

    BigDataViewer-based tool for visualizing multichannel multiscale N5 datasets.

    Java 19 11

Repositories

Showing 10 of 106 repositories
  • n5-ij Public

    ImageJ convenience layer for N5

    saalfeldlab/n5-ij’s past year of commit activity
    Java 16 BSD-2-Clause 12 25 (1 issue needs help) 1 Updated Dec 17, 2024
  • paintera Public
    saalfeldlab/paintera’s past year of commit activity
    Java 100 GPL-2.0 17 71 (12 issues need help) 3 Updated Dec 17, 2024
  • n5 Public

    Not HDF5

    saalfeldlab/n5’s past year of commit activity
    Java 165 BSD-2-Clause 22 16 4 Updated Dec 17, 2024
  • n5-zarr Public

    Zarr filesystem backend for N5

    saalfeldlab/n5-zarr’s past year of commit activity
    Java 14 BSD-2-Clause 15 4 4 Updated Dec 16, 2024
  • n5-universe Public

    Functionality shared across all n5

    saalfeldlab/n5-universe’s past year of commit activity
    Java 1 BSD-2-Clause 4 6 1 Updated Dec 16, 2024
  • render Public

    Render transformed image tiles

    saalfeldlab/render’s past year of commit activity
    Java 34 GPL-2.0 32 29 5 Updated Dec 13, 2024
  • n5-google-cloud Public

    N5 library implementation using Google Cloud Storage backend.

    saalfeldlab/n5-google-cloud’s past year of commit activity
    Java 1 BSD-2-Clause 3 1 0 Updated Dec 13, 2024
  • n5-aws-s3 Public

    N5 library implementation using Amazon Web Services S3 backend.

    saalfeldlab/n5-aws-s3’s past year of commit activity
    Java 5 BSD-2-Clause 6 4 0 Updated Dec 13, 2024
  • n5-viewer Public

    BigDataViewer-based tool for visualizing multichannel multiscale N5 datasets.

    saalfeldlab/n5-viewer’s past year of commit activity
    Java 19 GPL-3.0 11 8 2 Updated Nov 26, 2024
  • hot-knife Public
    saalfeldlab/hot-knife’s past year of commit activity
    Java 4 GPL-2.0 7 1 2 Updated Nov 23, 2024
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