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royfrancis/README.md

Hi there 👋

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Repositories

R Shiny

Web applications built in R using Shiny.

shiny-rnaseq-power Run power analyses for RNASeq experiments
shiny-nametagger Create name tags
shiny-doorsign Create door signage for office
shiny-planner A planner calendar
shiny-certificate Generate course certificates*
shiny-valkompass Runs PCA and plots your views on Swedish political latent space
pophelperShiny Visualise admixture proportions

Quarto and Rmarkdown

quarto-team Quarto extension to add a team layout
quarto-accordion Quarto extension to add accordions
specky Quarto website template for courses
quarto-reveal-logo Quarto extension to add logos to revealjs presentation
abstrave Quarto website template for courses
folium Quarto website template for NBIS projects
folium-webpage Quarto single page template for NBIS projects
minty Rmarkdown report and xaringan presentation template for NBIS projects
workshop-template-rmd-ga RMarkdown workshop website template with github actions
raukrtemplate Rmarkdown report and presentation template used for RaukR workshop 2018-2022

R packages

renvtools Read, write and compare renv lock files
plummy ggplot2 custom themes
easyshiny Generate shiny app from single-cell transcriptomics data
pixture HTML image gallery with lightbox using htmlwidgets
pophelper Analyse and visualise admixture proportions
iscrape Instagram scrapper

Teaching

raukr-2024 RaukR 2024: Advanced R for Bioinformatics*
workshop-scRNAseq Single cell RNAseq analysis*
workshop-ngsintro Introduction to Bioinformatics using NGS data*
workshop-rnaseq Analyses of Bulk RNAseq data*
raukr-2023 RaukR 2023: Advanced R for Bioinformatics*
RaukR-2022 RaukR 2022: Advanced R for Bioinformatics*
RaukR-2021 RaukR 2021: Advanced R for Bioinformatics*
course-r 2 day R course for beginners
RaukR-2019 RaukR 2019: Advanced R for Bioinformatics*
RaukR-2018 RaukR 2018: Advanced R for Bioinformatics*
workshop-r 5 day R course for beginners*

Other

SensorScope Film and camera sensor formats
Fontcheck Interactive font preview
SeqHub Knowledgebase for RNASeq and scRNASeq
r-calendar Photo calendar for print using R
sk Skandia mortgage interest rates interactive plot
docker-zellkonverter Docker image to run zellkonverter

*Hosted on organisation account.

Pinned Loading

  1. pophelper pophelper Public

    An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.

    R 144 38

  2. abstrave abstrave Public

    Quarto website template for courses

    SCSS 7 1

  3. specky specky Public

    Quarto website template for courses

    SCSS 1

  4. pixture pixture Public

    HTML Image Gallery in R with responsive layouts and lightbox

    JavaScript 13 3

  5. folium folium Public

    A quarto website template for NBIS project reports

    SCSS 1

  6. NBISweden/raukr NBISweden/raukr Public

    RaukR • R Beyond The Basics

    SCSS