Bump the minor_and_patch group across 1 directory with 6 updates #369

dependabot · 2025-03-03T05:20:05Z

Bumps the minor_and_patch group with 6 updates in the / directory:

Package	From	To
numpy	`2.1.3`	`2.2.3`
scipy	`1.14.1`	`1.15.2`
matplotlib	`3.9.2`	`3.10.1`
pylint	`3.3.1`	`3.3.4`
mypy	`1.13.0`	`1.15.0`
pytest	`8.3.3`	`8.3.5`

Updates numpy from 2.1.3 to 2.2.3

Release notes

Sourced from numpy's releases.

2.2.3 (Feb 13, 2025)

NumPy 2.2.3 Release Notes

NumPy 2.2.3 is a patch release that fixes bugs found after the 2.2.2 release. The majority of the changes are typing improvements and fixes for free threaded Python. Both of those areas are still under development, so if you discover new problems, please report them.

This release supports Python versions 3.10-3.13.

Contributors

A total of 9 people contributed to this release. People with a "+" by their names contributed a patch for the first time.

!amotzop

Charles Harris

Chris Sidebottom

Joren Hammudoglu

Matthew Brett

Nathan Goldbaum

Raghuveer Devulapalli

Sebastian Berg

Yakov Danishevsky +

Pull requests merged

A total of 21 pull requests were merged for this release.

#28185: MAINT: Prepare 2.2.x for further development

#28201: BUG: fix data race in a more minimal way on stable branch

#28208: BUG: Fix from_float_positional errors for huge pads

#28209: BUG: fix data race in np.repeat

#28212: MAINT: Use VQSORT_COMPILER_COMPATIBLE to determine if we should...

#28224: MAINT: update highway to latest

#28236: BUG: Add cpp atomic support (#28234)

#28237: BLD: Compile fix for clang-cl on WoA

#28243: TYP: Avoid upcasting float64 in the set-ops

#28249: BLD: better fix for clang / ARM compiles

#28266: TYP: Fix timedelta64.__divmod__ and timedelta64.__mod__...

#28274: TYP: Fixed missing typing information of set_printoptions

#28278: BUG: backport resource cleanup bugfix from gh-28273

#28282: BUG: fix incorrect bytes to stringdtype coercion

#28283: TYP: Fix scalar constructors

#28284: TYP: stub numpy.matlib

#28285: TYP: stub the missing numpy.testing modules

#28286: CI: Fix the github label for TYP: PR's and issues

#28305: TYP: Backport typing updates from main

#28321: BUG: fix race initializing legacy dtype casts

#28324: CI: update test_moderately_small_alpha

... (truncated)

Commits

a274561 Merge pull request #28322 from charris/prepare-2.2.3
5ab0f71 REL: Prepare for the NumPy 2.2.3 release [wheel build]
010ad9b Merge pull request #28324 from charris/update-test_dirichlet_moderately_small...
6338746 CI: update test_moderately_small_alpha [wheel build]
56f8d5b Merge pull request #28321 from charris/backport-28290
48515a3 MAINT: Update some testing files from main
96ca7e3 MAINT: respond to code review
c20ac88 MAINT: use a try/finally to make the deadlock protection more robust
d494647 MAINT: fix indentation and clarify comment
3f8fbd6 MAINT: go back to try/except
Additional commits viewable in compare view

Updates scipy from 1.14.1 to 1.15.2

Release notes

Sourced from scipy's releases.

SciPy 1.15.2 Release Notes

SciPy 1.15.2 is a bug-fix release with no new features compared to 1.15.1. Free-threaded Python 3.13 wheels for Linux ARM platform are available on PyPI starting with this release.

Authors

Name (commits)

Peter Bell (1)

Charles Bousseau (1) +

Jake Bowhay (3)

Matthew Brett (1)

Ralf Gommers (3)

Rohit Goswami (1)

Matt Haberland (4)

Parth Nobel (1) +

Tyler Reddy (33)

Daniel Schmitz (2)

Dan Schult (5)

Scott Shambaugh (2)

Edgar Andrés Margffoy Tuay (1)

Warren Weckesser (4)

A total of 14 people contributed to this release. People with a "+" by their names contributed a patch for the first time. This list of names is automatically generated, and may not be fully complete.

SciPy 1.15.1 Release Notes

SciPy 1.15.1 is a bug-fix release with no new features compared to 1.15.0. Importantly, an issue with the import of scipy.optimize breaking other packages has been fixed.

Authors

Name (commits)

Ralf Gommers (3)

Rohit Goswami (1)

Matt Haberland (2)

Tyler Reddy (7)

Daniel Schmitz (1)

... (truncated)

Commits

0f1fd4a REL: 1.15.2 rel commit [wheel build]
7df5cc6 Merge pull request #22471 from tylerjereddy/treddy_backports_1.15.2
a046fa0 CI: PR 22471 wheel builds [wheel build]
198aa52 DOC: PR 22471 revisions
ba61a58 CI: PR 22471 revisions
e0251ee do not check dtype in test_compare_with_GCVSPL
fcc68dd MAINT: integrate.cumulative_simpson: bump test tolerance
6d2c059 BUG: wrap median_filter stability (#22402)
59cb7d4 DOC: PR 22471 revisions
a60d17f MAINT: pearsonr SIMD-related shim
Additional commits viewable in compare view

Updates matplotlib from 3.9.2 to 3.10.1

Release notes

Sourced from matplotlib's releases.

REL: v3.10.1

This is the first bugfix release of the 3.10.x series.

This release contains several bug-fixes and adjustments:

Respect array alpha with interpolation_stage='rgba' in _Imagebase::_make_image

Remove md5 usage to prevent issues on FIPS enabled systems

Fix pyplot.matshow figure handling

Fix modifying Axes' position also alters the original Bbox object used for initialization

Fix title position for polar plots

Add version gate to GTK4 calls when necessary

Raise warning if both c and facecolors are used in scatter plot

As well as several documentation improvements and corrections.

REL: v3.10.0

Highlights of this release include:
- Preliminary support for free-threaded CPython 3.13
- New more-accessible color cycle
- Dark-mode diverging colormaps
- Exception handling control
- InsetIndicator artist
- FillBetweenPolyCollection
- Fill between 3D lines
- Data in 3D plots can now be dynamically clipped to the axes view limits
- Rotating 3d plots with the mouse
- Increased Figure limits with Agg renderer
- Subfigures no longer provisional
- Subfigures are now added in row-major order
Matplotlib v3.10.0rc1

This is the first release candidate for Matplotlib 3.10.0

REL: 3.9.4

This is the fourth bugfix release of the 3.9.x series.

This release contains two bug-fixes:

Fix toolbar icons in GTK backend

Fix Poly3DCollection initialization with list of lists

REL: 3.9.3

This is the third bugfix release of the 3.9.x series.

This release contains several bug-fixes and adjustments:

Fix axline with extremely small slopes

Fix axline with non-linear axis scales

Fix minimumSizeHint with Qt backend

... (truncated)

Commits

6fc8169 REL 3.10.1
33361fb Release notes v3.10.1
2495bbc Fix toctrees for 3.10 release notes
526785e Github stats v3.10.1
d23b173 Merge v3.10.0-doc into v3.10.x
9fe0dad Merge pull request #29682 from meeseeksmachine/auto-backport-of-pr-29680-on-v...
d3cf53d Merge pull request #29683 from meeseeksmachine/auto-backport-of-pr-29670-on-v...
2944994 Backport PR #29670: DOC: change marginal scatter plot to subplot_mosaic
b4f94a4 Backport PR #29680: DOC: fix the bug of examples\event_handling
4f3d478 Merge pull request #29676 from meeseeksmachine/auto-backport-of-pr-29666-on-v...
Additional commits viewable in compare view

Updates pylint from 3.3.1 to 3.3.4

Commits

c2b01c3 Bump pylint to 3.3.4, update changelog
023cd43 [isort] Permit to use isort 6 (#10204)
050acfe Calculate linter.config.jobs in cgroupsv2 environments (#10089) (#10169)
d6992b8 fix "skipped files" count calculation (#10141)
c28580b Bump pylint to 3.3.3, update changelog
1f9b947 Bump astroid from 3.3.5 to 3.3.8 (#10125) (#10155)
96d1303 Bump actions/cache from 4.1.2 to 4.2.0 (#10123) (#10154)
a7202b1 Fix Python 3.12 generic type syntax (#10135) (#10146)
90cb29d [mypy] Use type-setuptools instead of types-pkg-resources (#10120)
9955701 Fix 'use-implicit-booleaness' wrongly emitted for generators. (#10107) (#10109)
Additional commits viewable in compare view

Updates mypy from 1.13.0 to 1.15.0

Changelog

Sourced from mypy's changelog.

Mypy Release Notes

Next Release

Different Property Getter and Setter Types

Mypy now supports using different types for property getter and setter.
class A:
    value: int
@property
def f(self) -&gt; int:
    return self.value
@f.setter
def f(self, x: str | int) -&gt; None:
    try:
        self.value = int(x)
    except ValueError:
        raise Exception(f&quot;'{x}' is not a valid value for 'f'&quot;)
Contributed by Ivan Levkivskyi (PR 18510)

Selectively Disable Deprecated Warnings

It's now possible to selectively disable warnings generated from warnings.deprecated using the --deprecated-calls-exclude option.
# mypy --enable-error-code deprecated
#      --deprecated-calls-exclude=foo.A
import foo
foo.A().func()  # OK, the deprecated warning is ignored
file foo.py
from typing_extensions import deprecated
class A:
@deprecated("Use A.func2 instead")
def func(self): pass
Contributed by Marc Mueller (PR 18641)

Mypy 1.15

We’ve just uploaded mypy 1.15 to the Python Package Index (PyPI).

... (truncated)

Commits

9397454 remove +dev from version ahead of final release
686b591 remove "unreleased" from 1.15 changelog entry
cb4b243 Various small updates to 1.15 changelog (#18599)
1a26502 Prepare changelog for 1.15 release (#18583)
d4515e4 Fix a few PR links in the changelog (#18586)
f83b643 Add object self-type to tuple test fixture (#18592)
ebc2cb8 Prevent crash on generic NamedTuple with unresolved typevar bound (#18585)
63c251e empty commit to trigger wheel rebuild
c30573e Fix literal context for ternary expressions (for real) (#18545)
23d862d Fix isinstance with explicit (non generic) type alias (#18512)
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Updates pytest from 8.3.3 to 8.3.5

Release notes

Sourced from pytest's releases.

8.3.5

pytest 8.3.5 (2025-03-02)

Bug fixes

#11777: Fixed issue where sequences were still being shortened even with -vv verbosity.

#12888: Fixed broken input when using Python 3.13+ and a libedit build of Python, such as on macOS or with uv-managed Python binaries from the python-build-standalone project. This could manifest e.g. by a broken prompt when using Pdb, or seeing empty inputs with manual usage of input() and suspended capturing.

#13026: Fixed AttributeError{.interpreted-text role="class"} crash when using --import-mode=importlib when top-level directory same name as another module of the standard library.

#13053: Fixed a regression in pytest 8.3.4 where, when using --import-mode=importlib, a directory containing py file with the same name would cause an ImportError

#13083: Fixed issue where pytest could crash if one of the collected directories got removed during collection.

Improved documentation

#12842: Added dedicated page about using types with pytest.

See types{.interpreted-text role="ref"} for detailed usage.

Contributor-facing changes

#13112: Fixed selftest failures in test_terminal.py with Pygments >= 2.19.0

#13256: Support for Towncrier versions released in 2024 has been re-enabled when building Sphinx docs -- by webknjaz{.interpreted-text role="user"}.

8.3.4

pytest 8.3.4 (2024-12-01)

Bug fixes

#12592: Fixed KeyError{.interpreted-text role="class"} crash when using --import-mode=importlib in a directory layout where a directory contains a child directory with the same name.

#12818: Assertion rewriting now preserves the source ranges of the original instructions, making it play well with tools that deal with the AST, like executing.

#12849: ANSI escape codes for colored output now handled correctly in pytest.fail{.interpreted-text role="func"} with [pytrace=False]{.title-ref}.

#9353: pytest.approx{.interpreted-text role="func"} now uses strict equality when given booleans.

Improved documentation

#10558: Fix ambiguous docstring of pytest.Config.getoption{.interpreted-text role="func"}.

#10829: Improve documentation on the current handling of the --basetemp option and its lack of retention functionality (temporary directory location and retention{.interpreted-text role="ref"}).

... (truncated)

Commits

b55ab2a Prepare release version 8.3.5
e217726 Added dedicated page about using types with pytest #12842 (#12963) (#13260)
2fa3f83 Add more resources and studies to flaky tests page in docs (#13250) (#13259)
e5c2efe Merge pull request #13256 from webknjaz/maintenance/towncrier-bump (#13258)
3419674 Merge pull request #13187 from pytest-dev/patchback/backports/8.3.x/b4009b319...
b75cfb1 Add readline workaround for libedit (#13176)
edbfff7 doc: Clarify capturing .readouterr() return value (#13222) (#13225)
2ebba00 Merge pull request #13199 from jakkdl/tox_docs_no_fetch (#13200)
eb6496b doc: Change training to remote only (#13196) (#13197)
78cf1f6 ci: Bump build-and-inspect-python-package (#13188)
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brookshsmith · 2025-06-16T10:00:47Z

@dependabot rebase

dependabot · 2025-09-16T05:15:10Z

Dependabot tried to update this pull request, but something went wrong. We're looking into it, but in the meantime you can retry the update by commenting @dependabot rebase.

dependabot · 2025-09-16T05:50:10Z

Dependabot tried to update this pull request, but something went wrong. We're looking into it, but in the meantime you can retry the update by commenting @dependabot rebase.

Bumps the minor_and_patch group with 6 updates in the / directory: | Package | From | To | | --- | --- | --- | | [numpy](https://github.com/numpy/numpy) | `2.1.3` | `2.2.3` | | [scipy](https://github.com/scipy/scipy) | `1.14.1` | `1.15.2` | | [matplotlib](https://github.com/matplotlib/matplotlib) | `3.9.2` | `3.10.1` | | [pylint](https://github.com/pylint-dev/pylint) | `3.3.1` | `3.3.4` | | [mypy](https://github.com/python/mypy) | `1.13.0` | `1.15.0` | | [pytest](https://github.com/pytest-dev/pytest) | `8.3.3` | `8.3.5` | Updates `numpy` from 2.1.3 to 2.2.3 - [Release notes](https://github.com/numpy/numpy/releases) - [Changelog](https://github.com/numpy/numpy/blob/main/doc/RELEASE_WALKTHROUGH.rst) - [Commits](numpy/numpy@v2.1.3...v2.2.3) Updates `scipy` from 1.14.1 to 1.15.2 - [Release notes](https://github.com/scipy/scipy/releases) - [Commits](scipy/scipy@v1.14.1...v1.15.2) Updates `matplotlib` from 3.9.2 to 3.10.1 - [Release notes](https://github.com/matplotlib/matplotlib/releases) - [Commits](matplotlib/matplotlib@v3.9.2...v3.10.1) Updates `pylint` from 3.3.1 to 3.3.4 - [Release notes](https://github.com/pylint-dev/pylint/releases) - [Commits](pylint-dev/pylint@v3.3.1...v3.3.4) Updates `mypy` from 1.13.0 to 1.15.0 - [Changelog](https://github.com/python/mypy/blob/master/CHANGELOG.md) - [Commits](python/mypy@v1.13.0...v1.15.0) Updates `pytest` from 8.3.3 to 8.3.5 - [Release notes](https://github.com/pytest-dev/pytest/releases) - [Changelog](https://github.com/pytest-dev/pytest/blob/main/CHANGELOG.rst) - [Commits](pytest-dev/pytest@8.3.3...8.3.5) --- updated-dependencies: - dependency-name: numpy dependency-type: direct:production update-type: version-update:semver-minor dependency-group: minor_and_patch - dependency-name: scipy dependency-type: direct:production update-type: version-update:semver-minor dependency-group: minor_and_patch - dependency-name: matplotlib dependency-type: direct:production update-type: version-update:semver-minor dependency-group: minor_and_patch - dependency-name: pylint dependency-type: direct:development update-type: version-update:semver-patch dependency-group: minor_and_patch - dependency-name: mypy dependency-type: direct:development update-type: version-update:semver-minor dependency-group: minor_and_patch - dependency-name: pytest dependency-type: direct:development update-type: version-update:semver-patch dependency-group: minor_and_patch ... Signed-off-by: dependabot[bot] <[email protected]>

dependabot · 2025-10-13T05:06:04Z

Looks like these dependencies are updatable in another way, so this is no longer needed.

dependabot bot added dependencies Pull requests that update a dependency file python Pull requests that update Python code labels Mar 3, 2025

dependabot bot mentioned this pull request Mar 3, 2025

Bump the minor_and_patch group across 1 directory with 6 updates #367

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Bump the minor_and_patch group across 1 directory with 6 updates #369

Bump the minor_and_patch group across 1 directory with 6 updates #369

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Bump the minor_and_patch group across 1 directory with 6 updates #369

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2.2.3 (Feb 13, 2025)

NumPy 2.2.3 Release Notes

Contributors

Pull requests merged

SciPy 1.15.2 Release Notes

Authors

SciPy 1.15.1 Release Notes

Authors

REL: v3.10.1

REL: v3.10.0

Matplotlib v3.10.0rc1

REL: 3.9.4

REL: 3.9.3

Mypy Release Notes

Next Release

Different Property Getter and Setter Types

Selectively Disable Deprecated Warnings

Mypy 1.15

8.3.5

pytest 8.3.5 (2025-03-02)

Bug fixes

Improved documentation

Contributor-facing changes

8.3.4

pytest 8.3.4 (2024-12-01)

Bug fixes

Improved documentation

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