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1. What_the_Phage What_the_Phage Public

   WtP: Phage identification via nextflow and docker or singularity

   Nextflow 105 15

2. RVanDamme/MUFFIN RVanDamme/MUFFIN Public

   hybrid assembly and differential binning workflow for metagenomics, transcriptomics and pathway analysis

   Nextflow 69 13

3. poreCov poreCov Public

   SARS-CoV-2 workflow for nanopore sequence data

   Nextflow 41 17

4. docker_pipelines docker_pipelines Public

   Nextflow/Docker pipelines for "easy use"

   Nextflow 3 6

5. phiweger/clonepool phiweger/clonepool Public

   Increased PCR screening capacity using a multi-replicate pooling scheme

   TeX 1

6. MPOA MPOA Public

   Mask Pathogens for Outbreak Analysis

   Nextflow 2