build

Update environment.yml #181

	name: 'build'
	on:
	push:
	branches:
	- master
	- main
	pull_request:
	branches:
	- master
	- main

	jobs:
	build_conda:
	name: RAMP tests
	runs-on: "ubuntu-latest"
	defaults:
	run:
	shell: bash -l {0}
	steps:
	- uses: actions/checkout@v2
	- uses: conda-incubator/setup-miniconda@v2
	with:
	activate-environment: anaconda-client-env
	environment-file: environment.yml
	python-version: 3.8
	auto-activate-base: false
	- run: \|
	export RAMP_TEST_MODE=true # to have download_data.py just download the dummy dataset
	python download_data.py
	ramp-test --quick-test
	build_pip:
	name: Linux pip
	runs-on: ubuntu-latest

	steps:
	- uses: actions/checkout@v2
	- name: Set up Python 3.8
	uses: actions/setup-python@v2
	with:
	python-version: 3.8
	- name: Install dependencies
	run: \|
	python -m pip install --upgrade pip
	pip install flake8 nbconvert[test]
	if [ -f requirements.txt ]; then pip install -r requirements.txt; fi
	pip install git+https://github.com/AlexandreHutton/stroke
	- name: Test
	run: \|
	flake8 .py submissions//*.py
	export RAMP_TEST_MODE=true # to have download_data.py just download the dummy dataset
	python download_data.py
	ramp-test --quick-test
	ramp-test --submission sample --quick-test
	jupyter nbconvert --execute stroke_lesions_starting_kit.ipynb --to html --ExecutePreprocessor.kernel_name=python3

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