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41 changes: 17 additions & 24 deletions source/install/index.rst
Original file line number Diff line number Diff line change
Expand Up @@ -38,20 +38,20 @@ option for all cases. In general we recommend the following:

.. _distributions:

QIIME 2 2025.4 distributions
----------------------------
QIIME 2 2024.10 distributions
-----------------------------

As of 2025.4, QIIME 2 releases now include the following QIIME 2 distributions that are available for install:
As of 2024.10, QIIME 2 releases now include the following QIIME 2 distributions that are available for install:

- ``amplicon``
- ``moshpit``
- ``metagenome``
- ``pathogenome``
- ``tiny``

QIIME 2 2025.4 Amplicon Distribution
....................................
QIIME 2 2024.10 Amplicon Distribution
.....................................

The 2025.4 release of the QIIME 2 Amplicon Distribution includes the QIIME 2 framework, ``q2cli`` (a QIIME 2 command-line interface) and the following plugins:
The 2024.10 release of the QIIME 2 Amplicon Distribution includes the QIIME 2 framework, ``q2cli`` (a QIIME 2 command-line interface) and the following plugins:

- ``q2-alignment``
- ``q2-composition``
Expand All @@ -71,19 +71,16 @@ The 2025.4 release of the QIIME 2 Amplicon Distribution includes the QIIME 2 fra
- ``q2-quality-control``
- ``q2-quality-filter``
- ``q2-sample-classifier``
- ``q2-stats``
- ``q2-taxa``
- ``q2-types``
- ``q2-vizard``
- ``q2-vsearch``
- ``rescript``

QIIME 2 2025.4 MOSHPIT (formerly Metagenome) Distribution
.........................................................
QIIME 2 2024.10 Metagenome Distribution
.......................................

The 2025.4 release of the QIIME 2 MOSHPIT (formerly Metagenome) Distribution includes the QIIME 2 framework, ``q2cli`` (a QIIME 2 command-line interface) and the following plugins:
The 2024.10 release of the QIIME 2 Metagenome Distribution includes the QIIME 2 framework, ``q2cli`` (a QIIME 2 command-line interface) and the following plugins:

- ``q2-alignment``
- ``q2-assembly``
- ``q2-composition``
- ``q2-cutadapt``
Expand All @@ -101,25 +98,22 @@ The 2025.4 release of the QIIME 2 MOSHPIT (formerly Metagenome) Distribution inc
- ``q2-quality-filter``
- ``q2-sample-classifier``
- ``q2-sapienns``
- ``q2-sourmash``
- ``q2-taxa``
- ``q2-types``
- ``q2-vizard``
- ``q2-vsearch``
- ``rescript``

QIIME 2 2025.4 Pathogenome Distribution
.......................................
QIIME 2 2024.10 Pathogenome Distribution
........................................

The 2025.4 release of the QIIME 2 Pathogenome Distribution includes the QIIME 2 framework, ``q2cli`` (a QIIME 2 command-line interface) and the following plugins:
The 2024.10 release of the QIIME 2 Metagenome Distribution includes the QIIME 2 framework, ``q2cli`` (a QIIME 2 command-line interface) and the following plugins:

- ``q2-amrfinderplus``
- ``q2-assembly``
- ``q2-demux``
- ``q2-feature-classifier``
- ``q2-feature-table``
- ``q2-longitudinal``
- ``q2-metadata``
- ``q2-quality-control``
- ``q2-sample-classifier``
- ``q2-taxa``
Expand All @@ -128,15 +122,14 @@ The 2025.4 release of the QIIME 2 Pathogenome Distribution includes the QIIME 2
- ``q2-vizard``
- ``rescript``

QIIME 2 2025.4 Tiny Distribution
................................
QIIME 2 2024.10 Tiny Distribution
.................................

The 2025.4 release of the QIIME 2 Tiny Distribution includes the QIIME 2 framework and ``q2cli`` (a QIIME 2 command-line interface) and the following plugins:
The 2024.10 release of the QIIME 2 Tiny Distribution includes the QIIME 2 framework and ``q2cli`` (a QIIME 2 command-line interface) and the following plugins:

- ``q2-metadata``
- ``q2-types``

The QIIME 2 Tiny Distribution is a minimal QIIME 2 environment that can be used by developers who are in need of a basic development environment, or community plugin users who do not need the entire Amplicon, MOSHPIT or Pathogenome Distributions in their QIIME 2 environment.
The QIIME 2 Tiny Distribution is a minimal QIIME 2 environment that can be used by developers who are in need of a basic development environment, or community plugin users who do not need the entire Amplicon, Metagenome or Pathogenome Distributions in their QIIME 2 environment.

.. note:: The Amplicon Distribution is necessary to run the commands in the :doc:`QIIME 2 tutorials <../tutorials/index>`. If there are additional QIIME 2 plugins or interfaces you would like to install, please consult the relevant package(s) documentation.

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