change nucleation model from an 'underscore' app to a 'regular' app, …

…update version_changes.txt
prisms-center · Jun 19, 2017 · ecab2c4 · ecab2c4
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Showing 13 changed files with 5 additions and 3 deletions.
diff --git a/applications/_nucleationModel/CMakeLists.txt → applications/nucleationModel/CMakeLists.txt b/applications/_nucleationModel/CMakeLists.txt → applications/nucleationModel/CMakeLists.txt
diff --git a/applications/_nucleationModel/ICs_and_BCs.h → applications/nucleationModel/ICs_and_BCs.h b/applications/_nucleationModel/ICs_and_BCs.h → applications/nucleationModel/ICs_and_BCs.h
diff --git a/...tions/_nucleationModel/KKS_nucleation.pdf → ...ations/nucleationModel/KKS_nucleation.pdf b/...tions/_nucleationModel/KKS_nucleation.pdf → ...ations/nucleationModel/KKS_nucleation.pdf
diff --git a/applications/_nucleationModel/customPDE.h → applications/nucleationModel/customPDE.h b/applications/_nucleationModel/customPDE.h → applications/nucleationModel/customPDE.h
diff --git a/applications/_nucleationModel/equations.h → applications/nucleationModel/equations.h b/applications/_nucleationModel/equations.h → applications/nucleationModel/equations.h
diff --git a/applications/_nucleationModel/main.cc → applications/nucleationModel/main.cc b/applications/_nucleationModel/main.cc → applications/nucleationModel/main.cc
diff --git a/applications/_nucleationModel/nucleation.h → applications/nucleationModel/nucleation.h b/applications/_nucleationModel/nucleation.h → applications/nucleationModel/nucleation.h
diff --git a/applications/_nucleationModel/parameters.h → applications/nucleationModel/parameters.h b/applications/_nucleationModel/parameters.h → applications/nucleationModel/parameters.h
diff --git a/applications/_nucleationModel/postprocess.h → applications/nucleationModel/postprocess.h b/applications/_nucleationModel/postprocess.h → applications/nucleationModel/postprocess.h
diff --git a/applications/_nucleationModel/submit_mpi.pbs → applications/nucleationModel/submit_mpi.pbs b/applications/_nucleationModel/submit_mpi.pbs → applications/nucleationModel/submit_mpi.pbs
diff --git a/...leationModel/tex_files/KKS_nucleation.pdf → ...leationModel/tex_files/KKS_nucleation.pdf b/...leationModel/tex_files/KKS_nucleation.pdf → ...leationModel/tex_files/KKS_nucleation.pdf
diff --git a/...leationModel/tex_files/KKS_nucleation.tex → ...leationModel/tex_files/KKS_nucleation.tex b/...leationModel/tex_files/KKS_nucleation.tex → ...leationModel/tex_files/KKS_nucleation.tex
diff --git a/version_changes.txt b/version_changes.txt
@@ -6,10 +6,10 @@ capabilities were added.
 
 Added functionality:
 - Add postprocessing capabilities, which can be accessed in the new "postprocess.h" file in each application folder.
-- New applications "_nucleationModel" and "_preferential_nucleationModel" were added and include new nucleation capabilities.
+- New applications "nucleationModel" and "_preferential_nucleationModel" were added and include new nucleation capabilities.
 
 Changes to the pre-built applications:
-- New applications "_nucleationModel" and "_preferential_nucleationModel" were added and include new nucleation capabilities.
+- New applications "nucleationModel" and "_preferential_nucleationModel" were added and include new nucleation capabilities.
 - Changed the initial conditions for the Allen-Cahn and the Cahn-Hilliard applications to have smooth initial profiles.
 - The elastic constants are now accessed by "userInputs.CIJ_List" instead of just "CIJ_List" in the functions in equations.h.
 - Updated the gradient energy coefficient, the time step, and the mesh resolution of the Allen-Cahn application. Increased the
@@ -21,7 +21,8 @@ Changes to the pre-built applications:
   deal.II method.
 
 Performance improvements:
-- Updated how Dirichlet contraints are implemented, reducing the number of solver iterations for non-zero Dirichlet BCs.
+- Removed unnecessary applications of constraints, improving run times by up to 30%.
+- Updated how Dirichlet constraints are implemented, reducing the number of solver iterations for non-zero Dirichlet BCs.
 
 Bug fixes:
 - Dirichlet BCs now work for parabolic PDEs.
@@ -40,6 +41,7 @@ Other changes:
 Known issues:
 - PFields only work for scalar fields and only work when the variable with index zero is a scalar field.
 
+
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 Version 1.1.1:
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