Added rhizoTrak file headers.

src/main/java/legacy/bunwarpj/trakem2/transform/CubicBSplineTransform.java

@@ -1,3 +1,52 @@
+/* 
+ * This file is part of the rhizoTrak project.
+ * 
+ * Note that rhizoTrak extends TrakEM2, hence, its code base substantially 
+ * relies on the source code of the TrakEM2 project and the corresponding Fiji 
+ * plugin, initiated by A. Cardona in 2005. Large portions of rhizoTrak's code 
+ * are directly derived/copied from the source code of TrakEM2.
+ * 
+ * For more information on TrakEM2 please visit its websites:
+ * 
+ *  https://imagej.net/TrakEM2
+ * 
+ *  https://github.com/trakem2/TrakEM2/wiki
+ * 
+ * Fore more information on rhizoTrak, visit
+ *
+ *  https://github.com/prbio-hub/rhizoTrak/wiki
+ *
+ * Both projects, TrakEM2 and rhizoTrak, are released under GPL. 
+ * Please find below first the copyright notice of rhizoTrak, and further on
+ * (in case that this file was part of the original TrakEM2 source code base
+ * and contained a TrakEM2 file header) the original file header with the 
+ * TrakEM2 license note.
+ */
+
+/*
+ * Copyright (C) 2018 - @YEAR@ by the rhizoTrak development team
+ *
+ * This program is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or
+ * (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ * GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program.  If not, see <http://www.gnu.org/licenses/>.
+ *
+ * Fore more information on rhizoTrak, visit
+ *
+ *    https://github.com/prbio-hub/rhizoTrak/wiki
+ *
+ */
+
+/* === original file header below (if any) === */
+
 /**
  * License: GPL
  *

src/main/java/legacy/lenscorrection/DistortionCorrectionTask.java

@@ -1,3 +1,52 @@
+/* 
+ * This file is part of the rhizoTrak project.
+ * 
+ * Note that rhizoTrak extends TrakEM2, hence, its code base substantially 
+ * relies on the source code of the TrakEM2 project and the corresponding Fiji 
+ * plugin, initiated by A. Cardona in 2005. Large portions of rhizoTrak's code 
+ * are directly derived/copied from the source code of TrakEM2.
+ * 
+ * For more information on TrakEM2 please visit its websites:
+ * 
+ *  https://imagej.net/TrakEM2
+ * 
+ *  https://github.com/trakem2/TrakEM2/wiki
+ * 
+ * Fore more information on rhizoTrak, visit
+ *
+ *  https://github.com/prbio-hub/rhizoTrak/wiki
+ *
+ * Both projects, TrakEM2 and rhizoTrak, are released under GPL. 
+ * Please find below first the copyright notice of rhizoTrak, and further on
+ * (in case that this file was part of the original TrakEM2 source code base
+ * and contained a TrakEM2 file header) the original file header with the 
+ * TrakEM2 license note.
+ */
+
+/*
+ * Copyright (C) 2018 - @YEAR@ by the rhizoTrak development team
+ *
+ * This program is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or
+ * (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ * GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program.  If not, see <http://www.gnu.org/licenses/>.
+ *
+ * Fore more information on rhizoTrak, visit
+ *
+ *    https://github.com/prbio-hub/rhizoTrak/wiki
+ *
+ */
+
+/* === original file header below (if any) === */
+
 /**
  *
  */

src/main/java/legacy/lenscorrection/Distortion_Correction.java

@@ -1,3 +1,52 @@
+/* 
+ * This file is part of the rhizoTrak project.
+ * 
+ * Note that rhizoTrak extends TrakEM2, hence, its code base substantially 
+ * relies on the source code of the TrakEM2 project and the corresponding Fiji 
+ * plugin, initiated by A. Cardona in 2005. Large portions of rhizoTrak's code 
+ * are directly derived/copied from the source code of TrakEM2.
+ * 
+ * For more information on TrakEM2 please visit its websites:
+ * 
+ *  https://imagej.net/TrakEM2
+ * 
+ *  https://github.com/trakem2/TrakEM2/wiki
+ * 
+ * Fore more information on rhizoTrak, visit
+ *
+ *  https://github.com/prbio-hub/rhizoTrak/wiki
+ *
+ * Both projects, TrakEM2 and rhizoTrak, are released under GPL. 
+ * Please find below first the copyright notice of rhizoTrak, and further on
+ * (in case that this file was part of the original TrakEM2 source code base
+ * and contained a TrakEM2 file header) the original file header with the 
+ * TrakEM2 license note.
+ */
+
+/*
+ * Copyright (C) 2018 - @YEAR@ by the rhizoTrak development team
+ *
+ * This program is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or
+ * (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ * GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program.  If not, see <http://www.gnu.org/licenses/>.
+ *
+ * Fore more information on rhizoTrak, visit
+ *
+ *    https://github.com/prbio-hub/rhizoTrak/wiki
+ *
+ */
+
+/* === original file header below (if any) === */
+
 /**
 
 ImageJ plugin

src/main/java/legacy/lenscorrection/NonLinearTransform.java

@@ -1,3 +1,52 @@
+/* 
+ * This file is part of the rhizoTrak project.
+ * 
+ * Note that rhizoTrak extends TrakEM2, hence, its code base substantially 
+ * relies on the source code of the TrakEM2 project and the corresponding Fiji 
+ * plugin, initiated by A. Cardona in 2005. Large portions of rhizoTrak's code 
+ * are directly derived/copied from the source code of TrakEM2.
+ * 
+ * For more information on TrakEM2 please visit its websites:
+ * 
+ *  https://imagej.net/TrakEM2
+ * 
+ *  https://github.com/trakem2/TrakEM2/wiki
+ * 
+ * Fore more information on rhizoTrak, visit
+ *
+ *  https://github.com/prbio-hub/rhizoTrak/wiki
+ *
+ * Both projects, TrakEM2 and rhizoTrak, are released under GPL. 
+ * Please find below first the copyright notice of rhizoTrak, and further on
+ * (in case that this file was part of the original TrakEM2 source code base
+ * and contained a TrakEM2 file header) the original file header with the 
+ * TrakEM2 license note.
+ */
+
+/*
+ * Copyright (C) 2018 - @YEAR@ by the rhizoTrak development team
+ *
+ * This program is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or
+ * (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ * GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program.  If not, see <http://www.gnu.org/licenses/>.
+ *
+ * Fore more information on rhizoTrak, visit
+ *
+ *    https://github.com/prbio-hub/rhizoTrak/wiki
+ *
+ */
+
+/* === original file header below (if any) === */
+
 /**
 
 Copyright (C) 2008 Verena Kaynig.

src/main/java/legacy/lenscorrection/PolynomialModel2D.java

@@ -1,3 +1,52 @@
+/* 
+ * This file is part of the rhizoTrak project.
+ * 
+ * Note that rhizoTrak extends TrakEM2, hence, its code base substantially 
+ * relies on the source code of the TrakEM2 project and the corresponding Fiji 
+ * plugin, initiated by A. Cardona in 2005. Large portions of rhizoTrak's code 
+ * are directly derived/copied from the source code of TrakEM2.
+ * 
+ * For more information on TrakEM2 please visit its websites:
+ * 
+ *  https://imagej.net/TrakEM2
+ * 
+ *  https://github.com/trakem2/TrakEM2/wiki
+ * 
+ * Fore more information on rhizoTrak, visit
+ *
+ *  https://github.com/prbio-hub/rhizoTrak/wiki
+ *
+ * Both projects, TrakEM2 and rhizoTrak, are released under GPL. 
+ * Please find below first the copyright notice of rhizoTrak, and further on
+ * (in case that this file was part of the original TrakEM2 source code base
+ * and contained a TrakEM2 file header) the original file header with the 
+ * TrakEM2 license note.
+ */
+
+/*
+ * Copyright (C) 2018 - @YEAR@ by the rhizoTrak development team
+ *
+ * This program is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or
+ * (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ * GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program.  If not, see <http://www.gnu.org/licenses/>.
+ *
+ * Fore more information on rhizoTrak, visit
+ *
+ *    https://github.com/prbio-hub/rhizoTrak/wiki
+ *
+ */
+
+/* === original file header below (if any) === */
+
 /**
  * License: GPL
  *

src/main/java/legacy/mpi/fruitfly/general/ArrayConverter.java

@@ -1,3 +1,52 @@
+/* 
+ * This file is part of the rhizoTrak project.
+ * 
+ * Note that rhizoTrak extends TrakEM2, hence, its code base substantially 
+ * relies on the source code of the TrakEM2 project and the corresponding Fiji 
+ * plugin, initiated by A. Cardona in 2005. Large portions of rhizoTrak's code 
+ * are directly derived/copied from the source code of TrakEM2.
+ * 
+ * For more information on TrakEM2 please visit its websites:
+ * 
+ *  https://imagej.net/TrakEM2
+ * 
+ *  https://github.com/trakem2/TrakEM2/wiki
+ * 
+ * Fore more information on rhizoTrak, visit
+ *
+ *  https://github.com/prbio-hub/rhizoTrak/wiki
+ *
+ * Both projects, TrakEM2 and rhizoTrak, are released under GPL. 
+ * Please find below first the copyright notice of rhizoTrak, and further on
+ * (in case that this file was part of the original TrakEM2 source code base
+ * and contained a TrakEM2 file header) the original file header with the 
+ * TrakEM2 license note.
+ */
+
+/*
+ * Copyright (C) 2018 - @YEAR@ by the rhizoTrak development team
+ *
+ * This program is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or
+ * (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ * GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program.  If not, see <http://www.gnu.org/licenses/>.
+ *
+ * Fore more information on rhizoTrak, visit
+ *
+ *    https://github.com/prbio-hub/rhizoTrak/wiki
+ *
+ */
+
+/* === original file header below (if any) === */
+
 package legacy.mpi.fruitfly.general;
 
 /**

src/main/java/legacy/mpi/fruitfly/general/ImageArrayConverter.java

@@ -1,3 +1,52 @@
+/* 
+ * This file is part of the rhizoTrak project.
+ * 
+ * Note that rhizoTrak extends TrakEM2, hence, its code base substantially 
+ * relies on the source code of the TrakEM2 project and the corresponding Fiji 
+ * plugin, initiated by A. Cardona in 2005. Large portions of rhizoTrak's code 
+ * are directly derived/copied from the source code of TrakEM2.
+ * 
+ * For more information on TrakEM2 please visit its websites:
+ * 
+ *  https://imagej.net/TrakEM2
+ * 
+ *  https://github.com/trakem2/TrakEM2/wiki
+ * 
+ * Fore more information on rhizoTrak, visit
+ *
+ *  https://github.com/prbio-hub/rhizoTrak/wiki
+ *
+ * Both projects, TrakEM2 and rhizoTrak, are released under GPL. 
+ * Please find below first the copyright notice of rhizoTrak, and further on
+ * (in case that this file was part of the original TrakEM2 source code base
+ * and contained a TrakEM2 file header) the original file header with the 
+ * TrakEM2 license note.
+ */
+
+/*
+ * Copyright (C) 2018 - @YEAR@ by the rhizoTrak development team
+ *
+ * This program is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or
+ * (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ * GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program.  If not, see <http://www.gnu.org/licenses/>.
+ *
+ * Fore more information on rhizoTrak, visit
+ *
+ *    https://github.com/prbio-hub/rhizoTrak/wiki
+ *
+ */
+
+/* === original file header below (if any) === */
+
 package legacy.mpi.fruitfly.general;
 
 import ij.IJ;