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closes #4588; closes #4587; closes #4586; closes #4575; closes #4570;… #4589

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@ValWood ValWood commented Jul 29, 2024

… c;loses #4568

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github-actions bot commented Jul 29, 2024

Changes added to the edit file this PR

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Ontology comparison

Left

  • Ontology IRI: http://purl.obolibrary.org/obo/fypo.owl
  • Version IRI: None
  • Loaded from: file:/__w/fypo/fypo/master/src/ontology/fypo-edit.owl

Right

  • Ontology IRI: http://purl.obolibrary.org/obo/fypo.owl
  • Version IRI: None
  • Loaded from: file:/__w/fypo/fypo/src/ontology/fypo-edit.owl

Ontology imports

Ontology annotations

abolished polyphosphatase activity http://purl.obolibrary.org/obo/FYPO_0008276

Added

abolished protein kinase activity in response to osmotic stress http://purl.obolibrary.org/obo/FYPO_0008263

Added

abolished protein kinase activity in response to oxidative stress http://purl.obolibrary.org/obo/FYPO_0008264

Added

decreased cellular 1,5-IP8 level http://purl.obolibrary.org/obo/FYPO_0008281

Added

decreased cellular 1-IP7 level http://purl.obolibrary.org/obo/FYPO_0008283

Added

decreased cellular 5-IP7 level http://purl.obolibrary.org/obo/FYPO_0008282

Added

decreased cellular myo-inositol level http://purl.obolibrary.org/obo/FYPO_0008280

Added

decreased protein localization to CENP-A containing chromatin http://purl.obolibrary.org/obo/FYPO_0004313

Added

decreased protein localization to cell surface http://purl.obolibrary.org/obo/FYPO_0008258

Added

decreased protein localization to centromeric chromatin during mitotic G1 phase http://purl.obolibrary.org/obo/FYPO_0005895

Removed

Added

decreased protein localization to centromeric chromatin during mitotic metaphase http://purl.obolibrary.org/obo/FYPO_0006600

Removed

Added

decreased protein localization to centromeric chromatin, with protein mislocalized to nucleoplasm http://purl.obolibrary.org/obo/FYPO_0005888

Removed

Added

decreased protein localization to chromatin at centromere inner repeat http://purl.obolibrary.org/obo/FYPO_0005167

Removed

Added

decreased protein localization to chromatin at centromere outer repeat http://purl.obolibrary.org/obo/FYPO_0006818

Removed

Added

increased cellular 1,5-IP8 level http://purl.obolibrary.org/obo/FYPO_0008277

Added

increased cellular 1-IP7 level http://purl.obolibrary.org/obo/FYPO_0008279

Added

increased cellular 5-IP7 level http://purl.obolibrary.org/obo/FYPO_0008278

Added

normal cellular 1-IP7 level http://purl.obolibrary.org/obo/FYPO_0008286

Added

normal cellular 5-IP7 level http://purl.obolibrary.org/obo/FYPO_0008285

Added

normal cellular myo-inositol level http://purl.obolibrary.org/obo/FYPO_0008284

Added

normal polyphosphatase activity http://purl.obolibrary.org/obo/FYPO_0008275

Added

Changes to ontology after reasoner runs

Click to expand

Coming soon

Errors reported

Level	Rule Name	Subject	Property	Value
WARN	missing_definition	output_of	definition	
WARN	missing_definition	preceded_by	definition	
WARN	missing_definition	precedes	definition	
INFO	lowercase_definition	has_output	definition	p has output c if either: p has direct output c or p has output input c. Implies that if p happens, c always ensues.
INFO	missing_superclass	phenotype	rdfs:subClassOf	

@ValWood ValWood closed this Jul 29, 2024
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