Add flag support.

Changelog excerpt:
- Added the ability to add special, optional flags after the parameter when
  using the scan command, with the intent to modify scan behaviour.

Changelog.md

@@ -52,3 +52,6 @@ __*Why "v3.0.0" instead of "v1.0.0?"*__ Prior to phpMussel v3, the "phpMussel Co
 
 #### Bugs fixed.
 - [2024.10.15]: Parameters containing spaces weren't being parsed correctly by the recursiveCommand method; Fixed.
+
+#### Other changes.
+- [2024.10.15]: Added the ability to add special, optional flags after the parameter when using the scan command, with the intent to modify scan behaviour.

src/CLI.php

@@ -234,6 +234,10 @@ public function __construct(\phpMussel\Core\Loader &$Loader, \phpMussel\Core\Sca
             /** Scan a file or directory. */
             if (preg_match('~^(?:[Ss][Cc][Aa][Nn]|[Ss]|ѕ)$~', $CommandNatural)) {
                 $TargetData = substr($Clean, strlen($Command) + 1);
+                if (preg_match('~ --([A-Za-z]{2})$~', $TargetData, $Matches)) {
+                    $TargetData = substr($TargetData, 0, -5);
+                    $this->Loader->InstanceCache[$Matches[1]] = true;
+                }
                 echo "\n" . $this->Scanner->scan($TargetData) . "\n";
                 continue;
             }