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update missing repo scripts to take file arg, add two data files #354

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By submitting this PR, I am indicating to the PhET maintainers that I have read and understood
the contributing guidelines and that this PR follows those guidelines to the best of my knowledge.
I also understand that my PR can't be merged until I have singed the contributor license agreement.


<Please provide a high-level description of your PR.>

Expanded clone-missing-repos.sh to take a file argument from perennial/data. The intention is to enable an easy way to provide instructions to set up a simulation development environment without pulling every one of the PhET repos, which is what the phet development overview and current structure of clone-missing-repos.sh (hard codes perennial/data/active-repos). Updated print-missing-repos.sh to take the same argument and to accept it from clone-missing-repos.sh.

I tested with the additional example-sim and scenerystack-all data files I added.

I don't think this has any downstream effects or affects typical usage (default remains active-repos with no arg provided. Do let me know if that seems incorrect or there is a better way to implement.

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