PHENOTIPS BIBBOX application

Hints

• approx. time with medium fast internet connection: 15 minutes
• initial user/passwordd: Admin / admin

Docker Images Used

• BIBBOX/phenotips
• mySQL, offical mySQL container
• busybox, offical data container

Install Environment Variables

• MYSQL_ROOT_PASSWORD = password, only used within the docker container
• MYSQL_DATABASE = name of the mysql database, typical phenotips. The DB file is stored in the mounted volume
• MYSQL_USER = name of the mysql user, typical phenotips
• MYSQL_PASSWORD = mysql user password, only used within the docker container

Mounted Volumes

• the mysql datafolder /var/mysql will be mounted to /opt/apps/INSTANCE_NAME/var/mysql in your BIBBOX kit

Installation Instructions

• start your application in the dashboard
• phenotips will first intitialize its database (can take some minutes)
• in the distrubution wizard click on CONTINUE

• install the Phenotips Application interface by pressing INSTALL (this can take several minutes, up to a hour depending on your internet connectivity)

• press CONTINUE. Further Phenotips components are now downloaded, maybe you run in a timeout, dont worry just login and the download of the components will continue

• INITIAL-USER: Admin

• INITIAL-PASWORD admin

• press CONTINUE in some screens and you should arive at

• Change the admin password and continue with your configuration, as described at https://phenotips.org/AdminGuide/UserAdministration

https://raw.githubusercontent.com/bibbox/app-phenotips/tree/alpha.0.1/master/install-screen-04.png

After the installation

Have a nice ride with the new Admins youngtimer.