Merge pull request #33 from pha4ge/rigshospitalet

Rename `erasmus` to `rigshospitalet` (`mpxv/rigshospitalet/2500/v1.0.0`)
pha4ge · Sep 4, 2024 · bd23c1b · bd23c1b
2 parents 6a31e30 + 69112a8
commit bd23c1b
Show file tree

Hide file tree

Showing 9 changed files with 363 additions and 358 deletions.
diff --git a/README.md b/README.md
@@ -54,7 +54,7 @@ A scheme definition comprises *i)* a reference sequence (`reference.fasta`), *ii
 ### MPXV
 
 - `mpxv/yale/2000/v1.0.0`
-- `mpxv/erasmus/2500/v1.0.0`
+- `mpxv/rigshospitalet/2500/v1.0.0`
 
 ### NIV
 

diff --git a/index.yml b/index.yml
@@ -17,15 +17,17 @@ organisms:
   - Nipah virus
 schemes:
 - organism: mpxv
-  name: erasmus
+  name: rigshospitalet
+  aliases:
+  - erasmus
   amplicon_size: 2500
   version: v1.0.0
   developers:
+  - Martin Schou Pedersen
   - Matthijs Welkers
   - Marcel Jonges
   - Anton van den Ouden
-  definition_url: https://github.com/pha4ge/primer-schemes/tree/main/schemes/mpxv/erasmus/2500/v1.0.0
-  source_url: https://www.protocols.io/view/monkeypox-virus-whole-genome-sequencing-using-comb-n2bvj6155lk5
+  definition_url: https://github.com/pha4ge/primer-schemes/tree/main/schemes/mpxv/rigshospitalet/2500/v1.0.0
   citations:
   - https://www.protocols.io/view/monkeypox-virus-whole-genome-sequencing-using-comb-n2bvj6155lk5
   license: CC-BY-SA-4.0

diff --git a/schemes/mpxv/erasmus/2500/v1.0.0/primer.bed b/schemes/mpxv/erasmus/2500/v1.0.0/primer.bed