Formatting fixes

pha4ge · Dec 30, 2024 · 9f758db · 9f758db
1 parent 121e9ef
commit 9f758db
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Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/hAMRonization/AmrFinderPlusIO.py b/hAMRonization/AmrFinderPlusIO.py
@@ -79,7 +79,7 @@ def __init__(self, source, metadata):
             header = next(fh).strip().split("\t")
             try:
                 first_result = next(fh)
-                prot_id = header.index("Protein identifier") 
+                prot_id = header.index("Protein identifier")
                 if first_result.strip().split("\t")[prot_id] == "NA":
                     self.field_mapping = nucleotide_field_mapping
                 else:

diff --git a/hAMRonization/hAMRonizedResult.py b/hAMRonization/hAMRonizedResult.py
@@ -77,7 +77,7 @@ def __post_init__(self):
         input_file_name = getattr(self, "input_file_name")
         input_file_name = os.path.basename(input_file_name)
 
-        for suffix in [ ".gz", ".fna", ".fasta", ".fsa", ".faa", ".fa" ]:
+        for suffix in [".gz", ".fna", ".fasta", ".fsa", ".faa", ".fa"]:
             input_file_name = input_file_name.removesuffix(suffix)
 
         setattr(self, "input_file_name", input_file_name)