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1. Analysis-on-membrane-labeled-cell Analysis-on-membrane-labeled-cell Public

   Distinguish cells labeled with membrane structure and analyze the volume and intensity in each cell.

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2. Batch-assay-in-oil-red-stain Batch-assay-in-oil-red-stain Public

   This Fiji macro is designed to automatically measure the oil red occupation and intensity in tissues from tif files collected in a folder.

   ImageJ Macro 2

3. Cell-grouping Cell-grouping Public

   The red fluorescence labeled cells are distributed in a cluster manner. These tools are used to define the cluster code for each interested nucleus.

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4. Mitosis-phase-analysis Mitosis-phase-analysis Public

   A cell cycle occurs as a cell divides. The somatic cell leaves interphase, undergoes mitosis and eventually gives out two daughter cells. Mitosis is composed by a series of events including prophas…

   ImageJ Macro 1

5. Myotome-volume-Nucleus-count-and-Color-analysis Myotome-volume-Nucleus-count-and-Color-analysis Public

   The tools in this repository are designed to analyze the confocal images of zebrafish myotome whose membrane is labeled by the multicolor cell barcode (ref1). Three types of analysis done by five s…

   ImageJ Macro 1

6. Automatic-billing-system Automatic-billing-system Public

   To integrate the charging from the optical microscope, the advanced optical microscope and the electronic microscope, I designed this system to automatically sort bills to each PI and generate mont…