Add the brms_seed to loo_R2 #629
Workflow file for this run
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# Workflow derived from https://github.com/r-lib/actions/tree/master/examples | |
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | |
on: | |
push: | |
branches: [main, master] | |
pull_request: | |
branches: [main, master] | |
name: test-coverage | |
jobs: | |
test-coverage: | |
runs-on: ubuntu-latest | |
env: | |
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
steps: | |
- uses: actions/checkout@v2 | |
- uses: n1hility/cancel-previous-runs@v2 | |
with: | |
token: ${{ secrets.GITHUB_TOKEN }} | |
- uses: r-lib/actions/setup-r@v2 | |
with: | |
use-public-rspm: true | |
# As cmdstanr is not yet on CRAN, configure the action to only install the | |
# 'Depends' packages by default and then manually specify the 'Suggests' | |
# packages that are needed for R CMD CHECK | |
- uses: r-lib/actions/setup-r-dependencies@v2 | |
with: | |
dependencies: NA | |
extra-packages: | | |
R.rsp | |
knitr | |
rcmdcheck | |
rmarkdown | |
lme4 | |
mice | |
BH | |
MCMCglmm | |
ape | |
stan-dev/cmdstanr | |
RcppEigen | |
emmeans | |
projpred | |
RWiener | |
rtdists | |
extraDistr | |
spdep | |
mnormt | |
splines2 | |
arm | |
statmod | |
diffobj | |
usethis | |
testthat | |
covr | |
- name: Build Cmdstan | |
run: | | |
cmdstanr::check_cmdstan_toolchain(fix = TRUE) | |
cmdstanr::install_cmdstan(cores = parallel::detectCores()) | |
shell: Rscript {0} | |
- name: Test coverage | |
run: covr::codecov() | |
shell: Rscript {0} |