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✨ Improve fast-track #3217

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merged 3 commits into from
Aug 30, 2024
Merged

✨ Improve fast-track #3217

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76c37d9
:sparkles: Improve fast-track
Marigold Aug 30, 2024
2bb5d4d
wip
Marigold Aug 30, 2024
0cdf1d6
wip
Marigold Aug 30, 2024
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4 changes: 2 additions & 2 deletions apps/wizard/app_pages/fasttrack/fast_import.py
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Original file line number Diff line number Diff line change
Expand Up @@ -188,8 +188,8 @@ def data_diff(self) -> Tuple[bool, str]:
existing_data = pd.read_csv(self.snapshot.path)

exit_code = diff_print(
df1=existing_data,
df2=self.data.reset_index(),
df1=existing_data.set_index(["country", "year"]),
df2=self.data,
df1_label="existing",
df2_label="imported",
absolute_tolerance=0.00000001,
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3 changes: 3 additions & 0 deletions apps/wizard/app_pages/fasttrack/load.py
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Expand Up @@ -250,6 +250,9 @@ def import_google_sheets(url: str) -> Dict[str, Any]:


def parse_data_from_sheets(data_df: pd.DataFrame) -> pd.DataFrame:
# drop empty rows
data_df = data_df.dropna(how="all")

# lowercase columns names
for col in data_df.columns:
if col.lower() in ("entity", "year", "country"):
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6 changes: 3 additions & 3 deletions snapshots/fasttrack/latest/africa_cdc.csv.dvc
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Original file line number Diff line number Diff line change
Expand Up @@ -7,7 +7,7 @@ meta:
attribution_short: Africa CDC
url_main: https://africacdc.org/thematic-area/surveillance-and-disease-intelligence/africa-cdc-weekly-event-based-surveillance/
url_download: https://docs.google.com/spreadsheets/d/1KlqUXISKxEpvHxxG8rSzqT3YK5w0mEpJH0ttyAOGLwo/pub?output=csv
date_accessed: '2024-08-28'
date_accessed: '2024-08-30'
date_published: '2024-08-16'
license:
name: © All rights reserved Africa CDC
Expand All @@ -17,6 +17,6 @@ meta:
license:
name: © All rights reserved Africa CDC
outs:
- md5: cc20be7a41c443e4fb229b9544b62410
size: 1820
- md5: 28429135b7f4652e790a2af320ff574a
size: 1799
path: africa_cdc.csv
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