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    32 repositories

    • ADC-API-Plots

      Public
      HTML
      •
      GNU Lesser General Public License v3.0
      •1•0•0•4•Updated Nov 7, 2024Nov 7, 2024

    • config

      Public
      Configuration files (used by other iReceptor components)
      Shell
      •
      GNU Lesser General Public License v3.0
      •2•0•0•0•Updated Oct 30, 2024Oct 30, 2024

    • sandbox

      Public
      For experimenting with odds and ends
      Python
      •
      GNU General Public License v3.0
      •0•4•0•0•Updated Oct 21, 2024Oct 21, 2024

    • gateway

      Public
      iReceptor gateway
      PHP
      •
      GNU Lesser General Public License v3.0
      •0•2•0•0•Updated Oct 18, 2024Oct 18, 2024

    • turnkey-service-php

      Public
      Docker Turnkey for PHP/MongoDB service
      Shell
      •
      GNU Lesser General Public License v3.0
      •8•7•0•1•Updated Oct 3, 2024Oct 3, 2024

    • repository-mongodb

      Public
      Dockerized repository (MongoDB) for Docker turnkeys
      JavaScript
      •
      GNU Lesser General Public License v3.0
      •3•2•0•0•Updated Sep 11, 2024Sep 11, 2024

    • dataloading-curation

      Public
      Data curation files for IPA (iReceptor Public Archive) - includes sample metadata template file
      GNU Lesser General Public License v3.0
      •1•2•0•0•Updated Sep 10, 2024Sep 10, 2024

    • service-php-mongodb

      Public
      iReceptor service (PHP/MongoDB)
      PHP
      •
      GNU Lesser General Public License v3.0
      •4•1•0•3•Updated Sep 6, 2024Sep 6, 2024

    • dataloading-mongo

      Public
      Scripts to load data into a MongoDB service repository
      Python
      •
      GNU Lesser General Public License v3.0
      •3•0•1•1•Updated Sep 6, 2024Sep 6, 2024

    • ir_junction_aa_motif_search

      Public
      Docker container for iReceptor Junction AA Motif Search
      Python
      •
      GNU Lesser General Public License v2.1
      •0•0•0•0•Updated May 17, 2024May 17, 2024

    • ir_base_app

      Public
      A basic Analysis App for the iReceptor Gateway
      Dockerfile
      •
      GNU Lesser General Public License v2.1
      •0•0•0•0•Updated May 13, 2024May 13, 2024

    • rep-cred

      Public
      SW Tools Group - Repertoire Credibility Tool
      R
      •
      Creative Commons Attribution 4.0 International
      •3•0•0•0•Updated Apr 30, 2024Apr 30, 2024

    • TCRMatch

      Public
      Fork of TCRMatch for iReceptor Gateway App integration
      C++
      •
      Other
      •12•0•0•0•Updated Nov 3, 2023Nov 3, 2023

    • repository-admin-mongodb

      Public
      Web interface for MongoDB service repository
      PHP
      •
      GNU Lesser General Public License v3.0
      •0•0•0•3•Updated Aug 30, 2023Aug 30, 2023

    • ir_clone_stats

      Public
      Repo for iReceptor Clone analysis App
      GNU Lesser General Public License v2.1
      •0•0•0•0•Updated Jun 20, 2023Jun 20, 2023

    • ir_histogram

      Public
      iReceptor Gateway Histogram Analysis App
      Python
      •
      GNU Lesser General Public License v2.1
      •0•0•0•0•Updated Jun 20, 2023Jun 20, 2023

    • canarie-monitor

      Public
      Monitoring web app for CANARIE: returns IPA (iReceptor Public Archive) status. By aggregating statuses of the several IPA machines.
      PHP
      •
      GNU Lesser General Public License v3.0
      •0•0•0•5•Updated Apr 19, 2023Apr 19, 2023

    • ir_statistics

      Public
      iReceptor Gateway Statistics Analysis App
      GNU Lesser General Public License v2.1
      •0•0•0•0•Updated Mar 10, 2023Mar 10, 2023

    • immunarch

      Public
      🧬 Immunarch by ImmunoMind: R Package for Fast and Painless Exploration of Single-cell and Bulk T-cell/Antibody Immune Repertoires
      R
      •
      GNU Affero General Public License v3.0
      •66•0•0•0•Updated Mar 8, 2023Mar 8, 2023

    • conga

      Public
      Clonotype Neighbor Graph Analysis
      Jupyter Notebook
      •
      MIT License
      •18•0•0•0•Updated Feb 28, 2023Feb 28, 2023

    • celltypist

      Public
      A tool for semi-automatic cell type annotation
      Python
      •
      MIT License
      •46•0•0•0•Updated Feb 27, 2023Feb 27, 2023

    • performance-monitor

      Public
      Scripts to monitor the performance of the AIRR Data Commons
      Python
      •
      GNU Lesser General Public License v3.0
      •1•0•0•9•Updated Dec 8, 2022Dec 8, 2022

    • ireceptor-monitor

      Public
      Web app monitoring the iReceptor infrastructure
      Python
      •
      GNU Lesser General Public License v3.0
      •0•0•0•0•Updated Dec 17, 2021Dec 17, 2021

    • turnkey-gateway

      Public
      Docker turnkey for the iReceptor Gateway
      Shell
      •
      GNU General Public License v3.0
      •0•2•0•0•Updated May 13, 2021May 13, 2021

    • stats-api-ireceptor

      Public
      This repository contains Python code with iReceptor's Stats API vs Facet count test
      Python
      •
      GNU Lesser General Public License v3.0
      •1•0•0•0•Updated Apr 26, 2021Apr 26, 2021

    • service-awstats

      Public
      AWstats web statistics for service
      Dockerfile
      •
      GNU Lesser General Public License v3.0
      •0•0•0•0•Updated Oct 29, 2020Oct 29, 2020

    • AIRR-seqAA

      Public
      AIRR-seq Adaptive Adapter
      Python
      •
      GNU Lesser General Public License v3.0
      •2•1•3•0•Updated Aug 4, 2020Aug 4, 2020

    • turnkey-service

      Public
      [deprecated] Docker Turnkey for Javascript/MongoDB iReceptor service
      Shell
      •
      GNU Lesser General Public License v3.0
      •0•0•0•1•Updated Jul 27, 2020Jul 27, 2020

    • service-js-mongodb

      Public
      [deprecated] iReceptor service (Javascript/MongoDB)
      JavaScript
      •
      GNU Lesser General Public License v3.0
      •0•1•0•0•Updated Mar 6, 2020Mar 6, 2020

    • api

      Public
      iReceptor API definition (YAML)
      GNU Lesser General Public License v3.0
      •1•3•0•0•Updated Jun 6, 2019Jun 6, 2019